RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 RAB42Q8N4Z0 105 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 PIH1D2Q8WWB5 315 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 IGFLR1Q9H665 355 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 CD300AQ9UGN4 299 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 TESMINQ9Y4I5 508 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 LOC100506127A0A0U1RQW1 187 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 FAM25AB3EWG3 89 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 FAM25CB3EWG5 89 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 FAM25GB3EWG6 89 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 ATE1O95260 518 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 CRYZL1O95825 349 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 FADS2O95864 444 aaKnown RBP10.23□□□□□ -0.77
CALD1-203ENST00000393118 POU2F1P14859 743 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 FMO3P31513 532 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 CLCN7P51798 805 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 NTHL1P78549 312 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 CREMQ03060 361 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 C2orf80Q0P641 193 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 SLC13A2Q13183 592 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 PCBP2Q15366 365 aaKnown RBP eCLIP10.23□□□□□ -0.771e-7■□□□□ 10.9
CALD1-203ENST00000393118 ATP6AP1Q15904 470 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 RD3Q7Z3Z2 195 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 STX19Q8N4C7 294 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 PAWRQ96IZ0 340 aaKnown RBP10.23□□□□□ -0.77
CALD1-203ENST00000393118 EGLN2Q96KS0 407 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 ZNF717Q9BY31 904 aaPredicted RBP10.23□□□□□ -0.77
CALD1-203ENST00000393118 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.23□□□□□ -0.77
CALD1-203ENST00000393118 DUSP12Q9UNI6 340 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 CFAP20Q9Y6A4 193 aaKnown RBP10.23□□□□□ -0.77
CALD1-203ENST00000393118 F5P12259 2224 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 TSPAN6O43657 245 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 RASAL1O95294 804 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 CLTBP09497 229 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 PTPN2P17706 415 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 DGKGP49619 791 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 ALDH3A2P51648 485 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 CAP1Q01518 475 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 MEF2AQ02078 507 aaPredicted RBP10.23□□□□□ -0.77
CALD1-203ENST00000393118 GRIK2Q13002 908 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 RAB39AQ14964 217 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 HMBOX1Q6NT76 420 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 SUSD1Q6UWL2 747 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 HIPK1Q86Z02 1210 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 FATE1Q969F0 183 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 SLC35B4Q969S0 331 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 PPCDCQ96CD2 204 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 TIFAQ96CG3 184 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 REPS1Q96D71 796 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 DUSP26Q9BV47 211 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 C8orf4Q9NR00 106 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 USE1Q9NZ43 259 aa10.23□□□□□ -0.77
CALD1-203ENST00000393118 FAM92AA1XBS5 289 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 ANKRD34BA5PLL1 514 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 SLC9A3R1O14745 358 aaPredicted RBP10.22□□□□□ -0.77
CALD1-203ENST00000393118 ZDHHC11BP0C7U3 371 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 ITIH1P19827 911 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 CR2P20023 1033 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 CCT3P49368 545 aaKnown RBP10.22□□□□□ -0.77
CALD1-203ENST00000393118 SPIBQ01892 262 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 ZDHHC20Q5W0Z9 365 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 AGTRAPQ6RW13 159 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 SBSNQ6UWP8 590 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 GRASPQ7Z6J2 395 aaPredicted RBP10.22□□□□□ -0.77
CALD1-203ENST00000393118 THOC6Q86W42 341 aaKnown RBP10.22□□□□□ -0.77
CALD1-203ENST00000393118 PHYKPLQ8IUZ5 450 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 HMGCLL1Q8TB92 370 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 FAR1Q8WVX9 515 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 SCRN2Q96FV2 425 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 NODALQ96S42 347 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 DPH2Q9BQC3 489 aaPredicted RBP10.22□□□□□ -0.77
CALD1-203ENST00000393118 ZNF385DQ9H6B1 395 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 AGPAT4Q9NRZ5 378 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 PCDHB3Q9Y5E6 796 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 ABHD14A-ACY1A0A1B0GW23 586 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 FAM155AB1AL88 458 aaPredicted RBP10.22□□□□□ -0.77
CALD1-203ENST00000393118 FABP3P05413 133 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 CNTN1Q12860 1018 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 TRAF3Q13114 568 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 KCNAB2Q13303 367 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 TUBA3EQ6PEY2 450 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 IGFN1Q86VF2 1251 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 OR5AK3PQ8NH89 298 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 MCFD2Q8NI22 146 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 SLCO4A1Q96BD0 722 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 INPP5KQ9BT40 448 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 TMCC3Q9ULS5 477 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 TTC34A8MYJ7 566 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 H3BN98 237 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 QSOX1O00391 747 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 OR7A17O14581 309 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 MED26O95402 600 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 CHRNB1P11230 501 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 PRPS1L1P21108 318 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 CCR7P32248 378 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 GNG2P59768 71 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 ZXDBP98169 803 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 TP53BP2Q13625 1128 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 COL9A2Q14055 689 aaPredicted RBP10.22□□□□□ -0.77
CALD1-203ENST00000393118 GPR153Q6NV75 609 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 NOXRED1Q6NXP6 359 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms