RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 HLA-DPB1P04440 258 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 ITGB1P05556 798 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 ARL9Q6T311 187 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 LRCH3Q96II8 777 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 TM9SF3Q9HD45 589 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 EPOP01588 193 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 BCHEP06276 602 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 KLK1P06870 262 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 C6orf136Q5SQH8 315 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 SLC8B1Q6J4K2 584 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 SYCE2Q6PIF2 218 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 GDPD4Q6W3E5 623 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 GPALPP1Q8IXQ4 340 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 KREMEN2Q8NCW0 462 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 MUS81Q96NY9 551 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 HTATIP2Q9BUP3 242 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 SCAMP1O15126 338 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 CLDN7O95471 211 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 CBSLP0DN79 551 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 KCNA5P22460 613 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 ACVR2AP27037 513 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 CBSP35520 551 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 ERVK-21P61565 698 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 CD83Q01151 205 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 ZNF234Q14588 700 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 PRPF38BQ5VTL8 546 aaKnown RBP12.77□□□□□ -0.36
LCA5-202ENST00000392959 NANOGP8Q6NSW7 305 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 VITQ6UXI7 678 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 KCNJ9Q92806 393 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 RGMAQ96B86 450 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 SIPA1Q96FS4 1042 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 KXD1Q9BQD3 176 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 TRMT61BQ9BVS5 477 aaKnown RBP12.77□□□□□ -0.36
LCA5-202ENST00000392959 NANOGQ9H9S0 305 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 MRM3Q9HC36 420 aaKnown RBP12.77□□□□□ -0.36
LCA5-202ENST00000392959 UCKL1Q9NWZ5 548 aa12.77□□□□□ -0.36
LCA5-202ENST00000392959 AHCYP23526 432 aa12.77□□□□□ -0.37
LCA5-202ENST00000392959 MC1RQ01726 317 aa12.77□□□□□ -0.37
LCA5-202ENST00000392959 SLC13A2Q13183 592 aa12.77□□□□□ -0.37
LCA5-202ENST00000392959 KCNAB2Q13303 367 aa12.77□□□□□ -0.37
LCA5-202ENST00000392959 ZNF630Q2M218 657 aaPredicted RBP12.77□□□□□ -0.37
LCA5-202ENST00000392959 TPGS2Q68CL5 300 aa12.77□□□□□ -0.37
LCA5-202ENST00000392959 CEACAM20Q6UY09 585 aa12.77□□□□□ -0.37
LCA5-202ENST00000392959 CENPSQ8N2Z9 138 aa12.77□□□□□ -0.37
LCA5-202ENST00000392959 TOMM5Q8N4H5 51 aa12.77□□□□□ -0.37
LCA5-202ENST00000392959 ZNF676Q8N7Q3 588 aa12.77□□□□□ -0.37
LCA5-202ENST00000392959 AQP11Q8NBQ7 271 aa12.77□□□□□ -0.37
LCA5-202ENST00000392959 CEP76Q8TAP6 659 aa12.77□□□□□ -0.37
LCA5-202ENST00000392959 METTL21AQ8WXB1 218 aa12.77□□□□□ -0.37
LCA5-202ENST00000392959 NKD1Q969G9 470 aa12.77□□□□□ -0.37
LCA5-202ENST00000392959 ISOC1Q96CN7 298 aa12.77□□□□□ -0.37
LCA5-202ENST00000392959 CCDC115Q96NT0 180 aa12.77□□□□□ -0.37
LCA5-202ENST00000392959 MND1Q9BWT6 205 aa12.77□□□□□ -0.37
LCA5-202ENST00000392959 ANKHQ9HCJ1 492 aa12.77□□□□□ -0.37
LCA5-202ENST00000392959 GNB5O14775 395 aa12.77□□□□□ -0.37
LCA5-202ENST00000392959 DGKEP52429 567 aa12.77□□□□□ -0.37
LCA5-202ENST00000392959 TLR1Q15399 786 aa12.77□□□□□ -0.37
LCA5-202ENST00000392959 PPP1R3AQ16821 1122 aa12.77□□□□□ -0.37
LCA5-202ENST00000392959 NIPAL1Q6NVV3 410 aa12.77□□□□□ -0.37
LCA5-202ENST00000392959 DNAJA4Q8WW22 397 aaPredicted RBP12.77□□□□□ -0.37
LCA5-202ENST00000392959 HDAC2Q92769 488 aaKnown RBP12.77□□□□□ -0.37
LCA5-202ENST00000392959 SLC30A2Q9BRI3 323 aa12.77□□□□□ -0.37
LCA5-202ENST00000392959 ZSCAN5AQ9BUG6 496 aa12.77□□□□□ -0.37
LCA5-202ENST00000392959 IFT46Q9NQC8 304 aa12.77□□□□□ -0.37
LCA5-202ENST00000392959 PCDHGB1Q9Y5G3 927 aa12.77□□□□□ -0.37
LCA5-202ENST00000392959 A0A0U1RQF3 1178 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 PLOD2O00469 737 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 TLX2O43763 284 aaPredicted RBP12.76□□□□□ -0.37
LCA5-202ENST00000392959 CDRT1O95170 752 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 RB1P06400 928 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 PABPC4LP0CB38 370 aaKnown RBP12.76□□□□□ -0.37
LCA5-202ENST00000392959 IST1P53990 364 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 LRRC32Q14392 662 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 LAPTM4AQ15012 233 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 ULK3Q6PHR2 472 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 OTOP2Q7RTS6 562 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 CTU1Q7Z7A3 348 aaKnown RBP12.76□□□□□ -0.37
LCA5-202ENST00000392959 ADGRD2Q7Z7M1 963 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 THOC6Q86W42 341 aaKnown RBP12.76□□□□□ -0.37
LCA5-202ENST00000392959 NPAS3Q8IXF0 933 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 NFKBIDQ8NI38 313 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 SH3RF2Q8TEC5 729 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 DENND1AQ8TEH3 1009 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 HERVK_113Q902F9 699 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 CMTM7Q96FZ5 175 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 ALPK1Q96QP1 1244 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 C12orf4Q9NQ89 552 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 MKS1Q9NXB0 559 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 SCML2Q9UQR0 700 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 RNF11Q9Y3C5 154 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 ASB3Q9Y575 518 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 ITGA10O75578 1167 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 ATP1B2P14415 290 aaPredicted RBP12.76□□□□□ -0.37
LCA5-202ENST00000392959 ECHS1P30084 290 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 MAT2AP31153 395 aaKnown RBP12.76□□□□□ -0.37
LCA5-202ENST00000392959 LGR4Q9BXB1 951 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 ANKRD26Q9UPS8 1709 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 A0A1W2PRQ8 180 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 ENTPD6O75354 484 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 SCGNO76038 276 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms