RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 NATD1Q8N6N6 113 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 CXorf40AQ8TE69 158 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 ARNTL2Q8WYA1 636 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 MSANTD3Q96H12 275 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 MYRFLQ96LU7 910 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 WACQ9BTA9 647 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 FBXO10Q9UK96 956 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 FBXO9Q9UK97 447 aaPredicted RBP19.17■□□□□ 0.66
SHANK1-203ENST00000391813 C12orf71A8MTZ7 269 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 TEX46H3BTG2 121 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 ATG13O75143 517 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 ACRP10323 421 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 NSG1P42857 185 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 ARHGDIBP52566 201 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 ADAM8P78325 824 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 AGMOQ6ZNB7 445 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 MMAAQ8IVH4 418 aaKnown RBP19.17■□□□□ 0.66
SHANK1-203ENST00000391813 C2CD4AQ8NCU7 369 aaPredicted RBP19.17■□□□□ 0.66
SHANK1-203ENST00000391813 TMEM203Q969S6 136 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 PSMG2Q969U7 264 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 SLA2Q9H6Q3 261 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 FAM118AQ9NWS6 357 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 A8MV72 311 aaPredicted RBP19.17■□□□□ 0.66
SHANK1-203ENST00000391813 HCN1O60741 890 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 VEGFBP49765 207 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 RPS3AP61247 264 aaKnown RBP19.17■□□□□ 0.66
SHANK1-203ENST00000391813 NFKB2Q00653 900 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 RGS1Q08116 209 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 SLC13A2Q13183 592 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 SDHAF4Q5VUM1 108 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 ATG9BQ674R7 924 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 FAM46DQ8NEK8 389 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 HSH2DQ96JZ2 352 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 UCK2Q9BZX2 261 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 SOX17Q9H6I2 414 aaPredicted RBP19.17■□□□□ 0.66
SHANK1-203ENST00000391813 POPDC3Q9HBV1 291 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 MTMR10Q9NXD2 777 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 SLC1A7O00341 560 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 ARCN1P48444 511 aaKnown RBP19.17■□□□□ 0.66
SHANK1-203ENST00000391813 SMSP52788 366 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 RPL6Q02878 288 aaKnown RBP19.17■□□□□ 0.66
SHANK1-203ENST00000391813 STEAP4Q687X5 459 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 LSM14AQ8ND56 463 aaKnown RBP19.17■□□□□ 0.66
SHANK1-203ENST00000391813 CDKN2AIPNLQ96HQ2 116 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 FUZQ9BT04 418 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 FAM120CQ9NX05 1096 aaKnown RBP19.17■□□□□ 0.66
SHANK1-203ENST00000391813 ERVK-18Q9QC07 812 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 HCN4Q9Y3Q4 1203 aa19.17■□□□□ 0.66
SHANK1-203ENST00000391813 ARL6IP5O75915 188 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 CPN2P22792 545 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 ITGA3P26006 1051 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 PPP3R1P63098 170 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 HMBOX1Q6NT76 420 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 FRRS1Q6ZNA5 592 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 RGL4Q8IZJ4 473 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 NCSTNQ92542 709 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 IFT27Q9BW83 186 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 TMLHEQ9NVH6 421 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 OR2AT4A6NND4 320 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 ITGA10O75578 1167 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 APODP05090 189 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 F8A1P23610 371 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 GALNT2Q10471 571 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 ST3GAL4Q11206 333 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 GPM6BQ13491 265 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 RAET1GQ6H3X3 334 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 IGFN1Q86VF2 1251 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 KREMEN2Q8NCW0 462 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 OR4C6Q8NH72 309 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 CLEC4CQ8WTT0 213 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 ATPIF1Q9UII2 106 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 ARFGEF2Q9Y6D5 1785 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 H1F0P07305 194 aaKnown RBP19.16■□□□□ 0.66
SHANK1-203ENST00000391813 RPA4Q13156 261 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 KIAA1324Q6UXG2 1013 aaKnown RBP19.16■□□□□ 0.66
SHANK1-203ENST00000391813 CHCHD4Q8N4Q1 142 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 C1orf216Q8TAB5 229 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 ING5Q8WYH8 240 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 HYLS1Q96M11 299 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 ITM2CQ9NQX7 267 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 C14orf105Q9NVL8 296 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 CFAP97Q9P2B7 532 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 GABRQQ9UN88 632 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 OR10H1Q9Y4A9 318 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 FKBP7Q9Y680 259 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 MRPS14O60783 128 aaKnown RBP19.16■□□□□ 0.66
SHANK1-203ENST00000391813 ZNF432O94892 652 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 TFAP2AP05549 437 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 OPRL1P41146 370 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 MSANTD2Q6P1R3 559 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 DPY19L3Q6ZPD9 716 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 INO80EQ8NBZ0 244 aaPredicted RBP19.16■□□□□ 0.66
SHANK1-203ENST00000391813 SMURF1Q9HCE7 757 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 TCF7L1Q9HCS4 588 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 MARK1Q9P0L2 795 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 VPS29Q9UBQ0 182 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 PCDHGB7Q9Y5F8 929 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 ALG5Q9Y673 324 aa19.16■□□□□ 0.66
SHANK1-203ENST00000391813 IQCMA0A1B0GVH7 501 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 ISM1B1AKI9 464 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms