RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 MTMR12Q9C0I1 747 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 ZMYND12Q9H0C1 365 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 PDE7BQ9NP56 450 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 CHKBQ9Y259 395 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 RPS6KL1Q9Y6S9 549 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 ARID4BQ4LE39 1312 aaPredicted RBP2.59□□□□□ -2
TRAV40-201ENST00000390467 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.58□□□□□ -2
TRAV40-201ENST00000390467 GLTPD2A6NH11 291 aa2.58□□□□□ -2
TRAV40-201ENST00000390467 CASTOR2A6NHX0 329 aa2.58□□□□□ -2
TRAV40-201ENST00000390467 PTGESO14684 152 aa2.58□□□□□ -2
TRAV40-201ENST00000390467 NXPH4O95158 308 aa2.58□□□□□ -2
TRAV40-201ENST00000390467 PGM3O95394 542 aa2.58□□□□□ -2
TRAV40-201ENST00000390467 LINGO3P0C6S8 592 aa2.58□□□□□ -2
TRAV40-201ENST00000390467 PRKAR1AP10644 381 aa2.58□□□□□ -2
TRAV40-201ENST00000390467 IRF2P14316 349 aa2.58□□□□□ -2
TRAV40-201ENST00000390467 CYP11B2P19099 503 aa2.58□□□□□ -2
TRAV40-201ENST00000390467 CD22P20273 847 aa2.58□□□□□ -2
TRAV40-201ENST00000390467 SAT1P21673 171 aa2.58□□□□□ -2
TRAV40-201ENST00000390467 PAX3P23760 479 aa2.58□□□□□ -2
TRAV40-201ENST00000390467 ELAVL4P26378 380 aaKnown RBP2.58□□□□□ -2
TRAV40-201ENST00000390467 EIF2DP41214 584 aaKnown RBP2.58□□□□□ -2
TRAV40-201ENST00000390467 LHX1P48742 406 aa2.58□□□□□ -2
TRAV40-201ENST00000390467 ALDH3A2P51648 485 aa2.58□□□□□ -2
TRAV40-201ENST00000390467 TRAP1Q12931 704 aaKnown RBP2.58□□□□□ -2
TRAV40-201ENST00000390467 ZNF177Q13360 481 aaPredicted RBP2.58□□□□□ -2
TRAV40-201ENST00000390467 SPECC1Q5M775 1068 aa2.58□□□□□ -2
TRAV40-201ENST00000390467 C4orf50Q6ZRC1 276 aa2.58□□□□□ -2
TRAV40-201ENST00000390467 MARCH9Q86YJ5 346 aa2.58□□□□□ -2
TRAV40-201ENST00000390467 PTERQ96BW5 349 aa2.58□□□□□ -2
TRAV40-201ENST00000390467 MRPL1Q9BYD6 325 aaKnown RBP2.58□□□□□ -2
TRAV40-201ENST00000390467 SLC2A11Q9BYW1 496 aa2.58□□□□□ -2
TRAV40-201ENST00000390467 ANKZF1Q9H8Y5 726 aa2.58□□□□□ -2
TRAV40-201ENST00000390467 MTHFD2LQ9H903 347 aaPredicted RBP2.58□□□□□ -2
TRAV40-201ENST00000390467 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.58□□□□□ -2
TRAV40-201ENST00000390467 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.58□□□□□ -2
TRAV40-201ENST00000390467 TSPAN16Q9UKR8 245 aa2.58□□□□□ -2
TRAV40-201ENST00000390467 IGLV4-3A0A075B6K6 122 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 IGHV3-20A0A0C4DH32 117 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 GPRIN2O60269 458 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 ECE2O60344 883 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 ERAL1O75616 437 aaKnown RBP2.57□□□□□ -2
TRAV40-201ENST00000390467 TSPAN9O75954 239 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 ACSL3O95573 720 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 ALDH1B1P30837 517 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 ZNF75DP51815 510 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 CLDN15P56746 228 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 GEMIN4P57678 1058 aaKnown RBP2.57□□□□□ -2
TRAV40-201ENST00000390467 DHODHQ02127 395 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 SRSF9Q13242 221 aaKnown RBP eCLIP2.57□□□□□ -2
TRAV40-201ENST00000390467 CUL3Q13618 768 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 IL11RAQ14626 422 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 OR4C11Q6IEV9 310 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 FCRLAQ7L513 359 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 CHMP1BQ7LBR1 199 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 KRTAP11-1Q8IUC1 163 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 PHC2Q8IXK0 858 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 TAGAPQ8N103 731 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 NDUFAF2Q8N183 169 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 SUMF1Q8NBK3 374 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 OR5T2Q8NGG2 359 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 MOB3AQ96BX8 217 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 RSRC1Q96IZ7 334 aaKnown RBP2.57□□□□□ -2
TRAV40-201ENST00000390467 DGAT2Q96PD7 388 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 PI4K2AQ9BTU6 479 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 PANK2Q9BZ23 570 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 DNAI2Q9GZS0 605 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 ZHX3Q9H4I2 956 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 GPN1Q9HCN4 374 aaPredicted RBP2.57□□□□□ -2
TRAV40-201ENST00000390467 ABCB10Q9NRK6 738 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 OLAHQ9NV23 265 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 HAO2Q9NYQ3 351 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 MRPL15Q9P015 296 aaKnown RBP2.57□□□□□ -2
TRAV40-201ENST00000390467 STK26Q9P289 416 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 ZNF107Q9UII5 783 aaPredicted RBP2.57□□□□□ -2
TRAV40-201ENST00000390467 LNPEPQ9UIQ6 1025 aa2.57□□□□□ -2
TRAV40-201ENST00000390467 RSF1Q96T23 1441 aaPredicted RBP2.57□□□□□ -2
TRAV40-201ENST00000390467 IGHV3-38A0A0C4DH36 116 aa2.56□□□□□ -2
TRAV40-201ENST00000390467 MTMR11A4FU01 709 aa2.56□□□□□ -2
TRAV40-201ENST00000390467 GALR3O60755 368 aaPredicted RBP2.56□□□□□ -2
TRAV40-201ENST00000390467 PIK3R1P27986 724 aa2.56□□□□□ -2
TRAV40-201ENST00000390467 DCDC1P59894 354 aa2.56□□□□□ -2
TRAV40-201ENST00000390467 PRKG2Q13237 762 aa2.56□□□□□ -2
TRAV40-201ENST00000390467 CUL4AQ13619 759 aa2.56□□□□□ -2
TRAV40-201ENST00000390467 NPTX1Q15818 432 aa2.56□□□□□ -2
TRAV40-201ENST00000390467 VWC2Q2TAL6 325 aa2.56□□□□□ -2
TRAV40-201ENST00000390467 MS4A18Q3C1V0 323 aa2.56□□□□□ -2
TRAV40-201ENST00000390467 C6orf163Q5TEZ5 329 aa2.56□□□□□ -2
TRAV40-201ENST00000390467 CDHR3Q6ZTQ4 885 aa2.56□□□□□ -2
TRAV40-201ENST00000390467 SLC24A5Q71RS6 500 aa2.56□□□□□ -2
TRAV40-201ENST00000390467 DNAAF5Q86Y56 855 aa2.56□□□□□ -2
TRAV40-201ENST00000390467 FAM89BQ8N5H3 189 aa2.56□□□□□ -2
TRAV40-201ENST00000390467 LRTM2Q8N967 370 aa2.56□□□□□ -2
TRAV40-201ENST00000390467 TEKT4Q8WW24 435 aa2.56□□□□□ -2
TRAV40-201ENST00000390467 KLHL5Q96PQ7 755 aa2.56□□□□□ -2
TRAV40-201ENST00000390467 CHCHD5Q9BSY4 110 aa2.56□□□□□ -2
TRAV40-201ENST00000390467 MXD3Q9BW11 206 aa2.56□□□□□ -2
TRAV40-201ENST00000390467 ADNPQ9H2P0 1102 aa2.56□□□□□ -2
TRAV40-201ENST00000390467 EGLN3Q9H6Z9 239 aa2.56□□□□□ -2
TRAV40-201ENST00000390467 CNOT10Q9H9A5 744 aaKnown RBP2.56□□□□□ -2
TRAV40-201ENST00000390467 CDH20Q9HBT6 801 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms