RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 GTF2H3Q13889 308 aa11.24□□□□□ -0.61
PITRM1-202ENST00000380989 NPTX1Q15818 432 aa11.24□□□□□ -0.61
PITRM1-202ENST00000380989 RFTN2Q52LD8 501 aaPredicted RBP11.24□□□□□ -0.61
PITRM1-202ENST00000380989 ZNF648Q5T619 568 aaPredicted RBP11.24□□□□□ -0.61
PITRM1-202ENST00000380989 GCNT7Q6ZNI0 430 aa11.24□□□□□ -0.61
PITRM1-202ENST00000380989 CEP68Q76N32 757 aa11.24□□□□□ -0.61
PITRM1-202ENST00000380989 CYP4Z1Q86W10 505 aa11.24□□□□□ -0.61
PITRM1-202ENST00000380989 CCDC103Q8IW40 242 aa11.24□□□□□ -0.61
PITRM1-202ENST00000380989 NRBF2Q96F24 287 aa11.24□□□□□ -0.61
PITRM1-202ENST00000380989 CTRCQ99895 268 aa11.24□□□□□ -0.61
PITRM1-202ENST00000380989 TTYH2Q9BSA4 534 aa11.24□□□□□ -0.61
PITRM1-202ENST00000380989 TRIM15Q9C019 465 aa11.24□□□□□ -0.61
PITRM1-202ENST00000380989 ACTL8Q9H568 366 aa11.24□□□□□ -0.61
PITRM1-202ENST00000380989 MAGEE1Q9HCI5 957 aa11.24□□□□□ -0.61
PITRM1-202ENST00000380989 THG1LQ9NWX6 298 aaKnown RBP11.24□□□□□ -0.61
PITRM1-202ENST00000380989 ADGRE2Q9UHX3 823 aa11.24□□□□□ -0.61
PITRM1-202ENST00000380989 FKBPLQ9UIM3 349 aa11.24□□□□□ -0.61
PITRM1-202ENST00000380989 POLR3HQ9Y535 204 aaPredicted RBP11.24□□□□□ -0.61
PITRM1-202ENST00000380989 SNX5Q9Y5X3 404 aa11.24□□□□□ -0.61
PITRM1-202ENST00000380989 A0A087X1B8 175 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 NPIPB15A6NHN6 443 aaPredicted RBP11.23□□□□□ -0.61
PITRM1-202ENST00000380989 C2CD4DB7Z1M9 353 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 HOXC11O43248 304 aaPredicted RBP11.23□□□□□ -0.61
PITRM1-202ENST00000380989 FZD6O60353 706 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 MYCLP1P12525 358 aaPredicted RBP11.23□□□□□ -0.61
PITRM1-202ENST00000380989 SERPINB1P30740 379 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 TTKP33981 857 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 GDF5P43026 501 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 HMGCS1Q01581 520 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 MLLT1Q03111 559 aaPredicted RBP11.23□□□□□ -0.61
PITRM1-202ENST00000380989 RCAN2Q14206 197 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 CARD16Q5EG05 197 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 SNAP47Q5SQN1 464 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 ARMC12Q5T9G4 340 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 RIPOR3Q96MK2 946 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 HGH1Q9BTY7 390 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 HOXD1Q9GZZ0 328 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 ADPRHL2Q9NX46 363 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 KLHL3Q9UH77 587 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 SNX8Q9Y5X2 465 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 ZNF99A8MXY4 864 aaPredicted RBP11.23□□□□□ -0.61
PITRM1-202ENST00000380989 hCG_2039718K7EN88 272 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 TFECO14948 347 aaPredicted RBP11.23□□□□□ -0.61
PITRM1-202ENST00000380989 ANGPTL1O95841 491 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 BNIP2Q12982 314 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 CAMK2BQ13554 666 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 ATP6AP1LQ52LC2 224 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 FNDC3BQ53EP0 1204 aaKnown RBP11.23□□□□□ -0.61
PITRM1-202ENST00000380989 FAM209AQ5JX71 171 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 RSBN1Q5VWQ0 802 aaPredicted RBP11.23□□□□□ -0.61
PITRM1-202ENST00000380989 B3GNT8Q7Z7M8 397 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 AKAP14Q86UN6 197 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 LYSMD2Q8IV50 215 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 AFAP1L2Q8N4X5 818 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 BRSK1Q8TDC3 778 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 STON2Q8WXE9 905 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 ZNF641Q96N77 438 aaPredicted RBP11.23□□□□□ -0.61
PITRM1-202ENST00000380989 TRMT61BQ9BVS5 477 aaKnown RBP11.23□□□□□ -0.61
PITRM1-202ENST00000380989 BRD9Q9H8M2 597 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 TRPV4Q9HBA0 871 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 NEK6Q9HC98 313 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 ERVK13-1Q9NX77 482 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 CD84Q9UIB8 345 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 ITM2BQ9Y287 266 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 NEUROG3Q9Y4Z2 214 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 MEN1O00255 615 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 SNRPD1P62314 119 aaKnown RBP11.23□□□□□ -0.61
PITRM1-202ENST00000380989 TFF2Q03403 129 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 PTCHD3Q3KNS1 767 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 DLEU7Q6UYE1 221 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 Q6ZSR9 355 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 TICRRQ7Z2Z1 1910 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 PROX1Q92786 737 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 NEDD4LQ96PU5 975 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 ROGDIQ9GZN7 287 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 SLIRPQ9GZT3 109 aaKnown RBP11.23□□□□□ -0.61
PITRM1-202ENST00000380989 DSN1Q9H410 356 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 PCDHGA10Q9Y5H3 936 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 CCDC88CQ9P219 2028 aa11.23□□□□□ -0.61
PITRM1-202ENST00000380989 DYTNA2CJ06 578 aa11.22□□□□□ -0.61
PITRM1-202ENST00000380989 SMIM30A4D0T7 59 aa11.22□□□□□ -0.61
PITRM1-202ENST00000380989 GUCA1CO95843 209 aa11.22□□□□□ -0.61
PITRM1-202ENST00000380989 AZGP1P25311 298 aaKnown RBP11.22□□□□□ -0.61
PITRM1-202ENST00000380989 LIPAP38571 399 aa11.22□□□□□ -0.61
PITRM1-202ENST00000380989 CHRNB3Q05901 458 aa11.22□□□□□ -0.61
PITRM1-202ENST00000380989 CDK5R2Q13319 367 aa11.22□□□□□ -0.61
PITRM1-202ENST00000380989 ZNF234Q14588 700 aa11.22□□□□□ -0.61
PITRM1-202ENST00000380989 KIAA0907Q7Z7F0 614 aaPredicted RBP11.22□□□□□ -0.61
PITRM1-202ENST00000380989 ZNF540Q8NDQ6 660 aa11.22□□□□□ -0.61
PITRM1-202ENST00000380989 OR6Q1Q8NGQ2 317 aa11.22□□□□□ -0.61
PITRM1-202ENST00000380989 ZNF583Q96ND8 569 aa11.22□□□□□ -0.61
PITRM1-202ENST00000380989 ADGRE3Q9BY15 652 aa11.22□□□□□ -0.61
PITRM1-202ENST00000380989 REXO4Q9GZR2 422 aaKnown RBP11.22□□□□□ -0.61
PITRM1-202ENST00000380989 PALMDQ9NP74 551 aa11.22□□□□□ -0.61
PITRM1-202ENST00000380989 PRDM6Q9NQX0 595 aa11.22□□□□□ -0.61
PITRM1-202ENST00000380989 HEBP1Q9NRV9 189 aa11.22□□□□□ -0.61
PITRM1-202ENST00000380989 DDX28Q9NUL7 540 aaKnown RBP11.22□□□□□ -0.61
PITRM1-202ENST00000380989 TMEM9Q9P0T7 183 aa11.22□□□□□ -0.61
PITRM1-202ENST00000380989 RNF112Q9ULX5 631 aa11.22□□□□□ -0.61
PITRM1-202ENST00000380989 TAF4O00268 1085 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms