RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.27□□□□□ -1.25
CDKL5-201ENST00000379989 RPS6KA6Q9UK32 745 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 KCNK7Q9Y2U2 307 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 G3V2T6 193 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 PCDH17O14917 1159 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 HPGDSO60760 199 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 APOL3O95236 402 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 IGHV2-70P01814 119 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 F7P08709 466 aaPredicted RBP7.27□□□□□ -1.25
CDKL5-201ENST00000379989 KDELR1P24390 212 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 HOXA6P31267 233 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 MAGEA6P43360 314 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 STARP49675 285 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 GSK3BP49841 420 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 TAF6P49848 677 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 CDH13P55290 713 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 PRMT2P55345 433 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 PSPHP78330 225 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 CYP4F8P98187 520 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 SMN1Q16637 294 aaKnown RBP7.27□□□□□ -1.25
CDKL5-201ENST00000379989 AP5B1Q2VPB7 878 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 UGT3A2Q3SY77 523 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 RUNDC3AQ59EK9 446 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 MAP1SQ66K74 1059 aaPredicted RBP7.27□□□□□ -1.25
CDKL5-201ENST00000379989 SLC27A4Q6P1M0 643 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 ERICH5Q6P6B1 374 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 MACC1Q6ZN28 852 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 SLC26A9Q7LBE3 791 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 PTRH1Q86Y79 214 aaKnown RBP7.27□□□□□ -1.25
CDKL5-201ENST00000379989 CYP4Z2PQ8N1L4 340 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 MINDY1Q8N5J2 469 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 ZNF540Q8NDQ6 660 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 GPR151Q8TDV0 419 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 RAB7BQ96AH8 199 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 EXOC2Q96KP1 924 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 RTP3Q9BQQ7 232 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 OR51E2Q9H255 320 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 ZFP64Q9NPA5 681 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 PDGFCQ9NRA1 345 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 LGALS8O00214 317 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 PPP6CO00743 305 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 KCNN4O15554 427 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 POP7O75817 140 aaKnown RBP7.26□□□□□ -1.25
CDKL5-201ENST00000379989 RECQL5O94762 991 aaPredicted RBP7.26□□□□□ -1.25
CDKL5-201ENST00000379989 SERPINF2P08697 491 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 CHRM5P08912 532 aaPredicted RBP7.26□□□□□ -1.25
CDKL5-201ENST00000379989 ITGAMP11215 1152 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 PSMA2P25787 234 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 LHX1P48742 406 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 CLCN5P51795 746 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 GPR17Q13304 367 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 SWI5Q1ZZU3 235 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 HFEQ30201 348 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 PAN3Q58A45 887 aaKnown RBP7.26□□□□□ -1.25
CDKL5-201ENST00000379989 PDZK1Q5T2W1 519 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 SAXO2Q658L1 398 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 STEAP4Q687X5 459 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 PRMT9Q6P2P2 845 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 TMEM151AQ8N4L1 468 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 SRFBP1Q8NEF9 429 aaKnown RBP7.26□□□□□ -1.25
CDKL5-201ENST00000379989 GPR156Q8NFN8 814 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 OR11H4Q8NGC9 324 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 NSMAFQ92636 917 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 GTF3AQ92664 365 aaKnown RBP7.26□□□□□ -1.25
CDKL5-201ENST00000379989 FATE1Q969F0 183 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 TRIM43Q96BQ3 446 aaPredicted RBP7.26□□□□□ -1.25
CDKL5-201ENST00000379989 KIF12Q96FN5 646 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 ATXN7L3BQ96GX2 97 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 MRGPRX2Q96LB1 330 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 ZNF285Q96NJ3 590 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 SIGLEC11Q96RL6 698 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 ACE2Q9BYF1 805 aaPredicted RBP7.26□□□□□ -1.25
CDKL5-201ENST00000379989 SDCBP2Q9H190 292 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 BRD9Q9H8M2 597 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 GALNT9Q9HCQ5 603 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 ABCC13Q9NSE7 274 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 LYARQ9NX58 379 aaKnown RBP7.26□□□□□ -1.25
CDKL5-201ENST00000379989 MLXQ9UH92 298 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 FIS1Q9Y3D6 152 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 PCDHA9Q9Y5H5 950 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 TRPV2Q9Y5S1 764 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 PTCH2Q9Y6C5 1203 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 TRAV19A0A0A6YYK7 116 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 WDR27A2RRH5 827 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 A8MXK9 166 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 H7C2Y5 167 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 GPR182O15218 404 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 PLA2G10O15496 165 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 MRPS14O60783 128 aaKnown RBP7.26□□□□□ -1.25
CDKL5-201ENST00000379989 WDR47O94967 919 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 RPLP0P05388 317 aaKnown RBP7.26□□□□□ -1.25
CDKL5-201ENST00000379989 KLK3P07288 261 aaPredicted RBP7.26□□□□□ -1.25
CDKL5-201ENST00000379989 NFICP08651 508 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 H2AFB1P0C5Y9 115 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 H2AFB2P0C5Z0 115 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 HRH2P25021 359 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 KCNJ5P48544 419 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 C1QTNF8P60827 252 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 CRADDP78560 199 aa7.26□□□□□ -1.25
CDKL5-201ENST00000379989 ABATP80404 500 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms