RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 C1QTNF1Q9BXJ1 281 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 MS4A12Q9NXJ0 267 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 NPAP1Q9NZP6 1156 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 MRPS7Q9Y2R9 242 aaKnown RBP8.53□□□□□ -1.04
PCDH9-202ENST00000377865 FCF1Q9Y324 198 aaKnown RBP8.53□□□□□ -1.04
PCDH9-202ENST00000377865 RWDD3Q9Y3V2 267 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 TTC24A2A3L6 582 aaPredicted RBP8.53□□□□□ -1.04
PCDH9-202ENST00000377865 H3BM21 787 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 SLC16A5O15375 505 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 PEX10O60683 326 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 MTAPQ13126 283 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 C9orf131Q5VYM1 1079 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 PAMR1Q6UXH9 720 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 SLC24A5Q71RS6 500 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 DOHHQ9BU89 302 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 RNF39Q9H2S5 420 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 TAS2R9Q9NYW1 312 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 CD300AQ9UGN4 299 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 SARDHQ9UL12 918 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 Q9Y3F1 56 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 GPR45Q9Y5Y3 372 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 AKAP8O43823 692 aaKnown RBP8.53□□□□□ -1.04
PCDH9-202ENST00000377865 CDRT1O95170 752 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 OXSR1O95747 527 aaPredicted RBP8.53□□□□□ -1.04
PCDH9-202ENST00000377865 GLUD1P00367 558 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 RPS17P08708 135 aaKnown RBP8.53□□□□□ -1.04
PCDH9-202ENST00000377865 GNAO1P09471 354 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 GSTT2BP0CG30 244 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 MAGEA11P43364 429 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 GSTM4Q03013 218 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 DUSP4Q13115 394 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 TARDBPQ13148 414 aaKnown RBP eCLIP8.53□□□□□ -1.04
PCDH9-202ENST00000377865 PROX2Q3B8N5 592 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 ZNF311Q5JNZ3 666 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 AGAP7PQ5VUJ5 663 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 RAET1GQ6H3X3 334 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 LIN54Q6MZP7 749 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 LINGO4Q6UY18 593 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 AQP11Q8NBQ7 271 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 ATAD1Q8NBU5 361 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 OLIG1Q8TAK6 271 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 CXorf40AQ8TE69 158 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 SLC35G5Q96KT7 338 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 TEPSINQ96N21 525 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 COMMD3Q9UBI1 195 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 ZNF780BQ9Y6R6 833 aa8.53□□□□□ -1.04
PCDH9-202ENST00000377865 KAT6AQ92794 2004 aa8.52□□□□□ -1.04
PCDH9-202ENST00000377865 TAF1P21675 1872 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 BEST1O76090 585 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 H1F0P07305 194 aaKnown RBP8.52□□□□□ -1.05
PCDH9-202ENST00000377865 SMSP52788 366 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 ATP12AP54707 1039 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 ABATP80404 500 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 RBBP4Q09028 425 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 PCBP2Q15366 365 aaKnown RBP eCLIP8.52□□□□□ -1.05
PCDH9-202ENST00000377865 C10orf62Q5T681 223 aaPredicted RBP8.52□□□□□ -1.05
PCDH9-202ENST00000377865 CXorf57Q6NSI4 855 aaKnown RBP8.52□□□□□ -1.05
PCDH9-202ENST00000377865 METTL2BQ6P1Q9 378 aaKnown RBP8.52□□□□□ -1.05
PCDH9-202ENST00000377865 NAT16Q8N8M0 369 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 CREB3L1Q96BA8 519 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 AP2M1Q96CW1 435 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 GFM1Q96RP9 751 aaKnown RBP8.52□□□□□ -1.05
PCDH9-202ENST00000377865 BAIAP2Q9UQB8 552 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 PCDHGB1Q9Y5G3 927 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 A0A1W2PRB8 838 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 TRBC2A0A5B9 178 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 MATN1P21941 496 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 STOMP27105 288 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 ERP29P30040 261 aaKnown RBP8.52□□□□□ -1.05
PCDH9-202ENST00000377865 GANABQ14697 944 aaKnown RBP8.52□□□□□ -1.05
PCDH9-202ENST00000377865 KCTD11Q693B1 232 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 RASSF6Q6ZTQ3 369 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 OR6K2Q8NGY2 324 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 DPAGT1Q9H3H5 408 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 OSGEPL1Q9H4B0 414 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 MARCH4Q9P2E8 410 aaPredicted RBP8.52□□□□□ -1.05
PCDH9-202ENST00000377865 AASSQ9UDR5 926 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 CDH7Q9ULB5 785 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 PCDHA9Q9Y5H5 950 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 IRAK3Q9Y616 596 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 PDCD5O14737 125 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 SLC9A3R1O14745 358 aaPredicted RBP8.52□□□□□ -1.05
PCDH9-202ENST00000377865 PRKCGP05129 697 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 STARP49675 285 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 NUDT6P53370 316 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 MAPK12P53778 367 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 CLDN8P56748 225 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 FKBP1BP68106 108 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 ST3GAL4Q11206 333 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 CBX2Q14781 532 aaPredicted RBP8.52□□□□□ -1.05
PCDH9-202ENST00000377865 SLC14A2Q15849 920 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 KCNA10Q16322 511 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 ZNF792Q3KQV3 632 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 PAGE3Q5JUK9 113 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 TRNP1Q6NT89 227 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 ZNF783Q6ZMS7 281 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 DTWD1Q8N5C7 304 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 CHDHQ8NE62 594 aaPredicted RBP8.52□□□□□ -1.05
PCDH9-202ENST00000377865 NFKBIDQ8NI38 313 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 UHRF1Q96T88 793 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms