RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 COLEC12Q5KU26 742 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 PDSS1Q5T2R2 415 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.26□□□□□ -0.293e-6■■□□□ 13
GPC6-201ENST00000377047 CDH24Q86UP0 819 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 SMARCD2Q92925 531 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 OMA1Q96E52 524 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 FEM1AQ9BSK4 669 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 B3GAT2Q9NPZ5 323 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 MOCS1Q9NZB8 636 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 TELO2Q9Y4R8 837 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 DAPL1A0PJW8 107 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 CLEC3AO75596 197 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 MXD1Q05195 221 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 ZC3HC1Q86WB0 502 aaKnown RBP13.25□□□□□ -0.29
GPC6-201ENST00000377047 ZSCAN1Q8NBB4 408 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 OR2M4Q96R27 311 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 PEBP4Q96S96 227 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 EBF4Q9BQW3 602 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 WASHC1A8K0Z3 465 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 WASH3PC4AMC7 463 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 MAN2B1O00754 1011 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 OPN1SWP03999 348 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 SRPRAP08240 638 aaKnown RBP13.25□□□□□ -0.29
GPC6-201ENST00000377047 RAP2AP10114 183 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 MTHFD1P11586 935 aaKnown RBP13.25□□□□□ -0.29
GPC6-201ENST00000377047 ID2Q02363 134 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 CD47Q08722 323 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 SNTA1Q13424 505 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 MAMDC4Q6UXC1 1216 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 WASH2PQ6VEQ5 465 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 C12orf40Q86WS4 652 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 CCDC54Q8NEL0 328 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 PHOSPHO1Q8TCT1 267 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 JPH3Q8WXH2 748 aaPredicted RBP13.25□□□□□ -0.29
GPC6-201ENST00000377047 ZDHHC12Q96GR4 267 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 CHCHD6Q9BRQ6 235 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 RBCK1Q9BYM8 510 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 POLR2J3Q9H1A7 115 aaKnown RBP13.25□□□□□ -0.29
GPC6-201ENST00000377047 SEC61A2Q9H9S3 476 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 FANCFQ9NPI8 374 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 CENPMQ9NSP4 180 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 ING4Q9UNL4 249 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 HSD11B1P28845 292 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 HNF1BP35680 557 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 GPR153Q6NV75 609 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 PLEKHO2Q8TD55 490 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 SLC29A3Q9BZD2 475 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 TCF7L1Q9HCS4 588 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 BRD7Q9NPI1 651 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 FAM159BA6NKW6 160 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 C2orf74A8MZ97 194 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 NPIPA5E9PKD4 350 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 CREB1P16220 341 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 ZNF3P17036 446 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 BCAP31P51572 246 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 VSX2P58304 361 aaPredicted RBP13.25□□□□□ -0.29
GPC6-201ENST00000377047 SOX4Q06945 474 aaPredicted RBP13.25□□□□□ -0.29
GPC6-201ENST00000377047 SP140Q13342 867 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 CRB2Q5IJ48 1285 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 C1orf74Q96LT6 269 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 XKR8Q9H6D3 395 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 RC3H2Q9HBD1 1191 aaKnown RBP13.25□□□□□ -0.29
GPC6-201ENST00000377047 NPIPA1Q9UND3 350 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 RNF11Q9Y3C5 154 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 WRBO00258 174 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 BTN3A3O00478 584 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 CD2P06729 351 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 STC1P52823 247 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 TMEM198Q66K66 360 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 CILP2Q8IUL8 1156 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 MMABQ96EY8 250 aaPredicted RBP13.25□□□□□ -0.29
GPC6-201ENST00000377047 ZSWIM3Q96MP5 696 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 PAAF1Q9BRP4 392 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 CHID1Q9BWS9 393 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 LRRC3Q9BY71 257 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 DERL2Q9GZP9 239 aa13.25□□□□□ -0.29
GPC6-201ENST00000377047 TTC34A8MYJ7 566 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 FOSL2P15408 326 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 SHMT2P34897 504 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 CHAF1BQ13112 559 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 C1orf61Q13536 156 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 DUOXA1Q1HG43 343 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 ZDHHC24Q6UX98 284 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 OR52E4Q8NGH9 312 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 DIRAS2Q96HU8 199 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 GIN1Q9NXP7 522 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 DLG5Q8TDM6 1919 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 TFECO14948 347 aaPredicted RBP13.24□□□□□ -0.29
GPC6-201ENST00000377047 ONECUT3O60422 494 aaPredicted RBP13.24□□□□□ -0.29
GPC6-201ENST00000377047 NOS1APO75052 506 aaPredicted RBP13.24□□□□□ -0.29
GPC6-201ENST00000377047 SOCS5O75159 536 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 ZNF41P51814 821 aaPredicted RBP13.24□□□□□ -0.29
GPC6-201ENST00000377047 MEF2AQ02078 507 aaPredicted RBP13.24□□□□□ -0.29
GPC6-201ENST00000377047 TAS1R3Q7RTX0 852 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 NFKBIDQ8NI38 313 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 KLHL6Q8WZ60 621 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 EPYCQ99645 322 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 ACSL5Q9ULC5 683 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 RAB26Q9ULW5 256 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 PCDHGB5Q9Y5G0 923 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms