RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 PPP1R3AQ16821 1122 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.69■□□□□ 0.26
MCF2L-203ENST00000375604 STX12Q86Y82 276 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 CMTR2Q8IYT2 770 aaKnown RBP16.69■□□□□ 0.26
MCF2L-203ENST00000375604 C17orf62Q9BQA9 187 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 ADAM7Q9H2U9 754 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 M0R2N6 131 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 TGFBR2P37173 567 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 ARHGDIBP52566 201 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 TMEM156Q8N614 296 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 SCAMP4Q969E2 229 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 CALML5Q9NZT1 146 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 RAB26Q9ULW5 256 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 PDE10AQ9Y233 779 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 ZNF142P52746 1687 aaPredicted RBP16.69■□□□□ 0.26
MCF2L-203ENST00000375604 DLG5Q8TDM6 1919 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 ZNF20P17024 532 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 TAS1R3Q7RTX0 852 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 ZNF761Q86XN6 746 aaPredicted RBP16.69■□□□□ 0.26
MCF2L-203ENST00000375604 PTGDR2Q9Y5Y4 395 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 ERVK-8P63133 956 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 RIN1Q13671 783 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 CCINQ13939 588 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 EIPR1Q53HC9 387 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 UFD1Q92890 307 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 CITED4Q96RK1 184 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 A0A1W2PQ72 361 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 DPPA5A6NC42 116 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 DLX3O60479 287 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 SDC3O75056 442 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 CSTF2P33240 577 aaKnown RBP eCLIP16.69■□□□□ 0.26
MCF2L-203ENST00000375604 HNF1BP35680 557 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 SOX4Q06945 474 aaPredicted RBP16.69■□□□□ 0.26
MCF2L-203ENST00000375604 RAB30Q15771 203 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 CDCA2Q69YH5 1023 aaPredicted RBP16.69■□□□□ 0.26
MCF2L-203ENST00000375604 CRELD2Q6UXH1 353 aaPredicted RBP16.69■□□□□ 0.26
MCF2L-203ENST00000375604 CEACAM20Q6UY09 585 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 C10orf82Q8WW14 230 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 TLCD1Q96CP7 247 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 PCDHB11Q9Y5F2 797 aa16.69■□□□□ 0.26
MCF2L-203ENST00000375604 KCPQ6ZWJ8 1503 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 C9J4A7 227 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 CARD17Q5XLA6 110 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 HM13Q8TCT9 377 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 NSUN3Q9H649 340 aaKnown RBP16.68■□□□□ 0.26
MCF2L-203ENST00000375604 MOCS1Q9NZB8 636 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 H7BY64 318 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 MANBAO00462 879 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 PGAM2P15259 253 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 CASRP41180 1078 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 CCR3P51677 355 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 PDX1P52945 283 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 RPL6Q02878 288 aaKnown RBP16.68■□□□□ 0.26
MCF2L-203ENST00000375604 LMAN2Q12907 356 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 PTCHD3Q3KNS1 767 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 RAB6CQ53S08 254 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 FRG2Q64ET8 278 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 FAM180BQ6P0A1 224 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 TTLL10Q6ZVT0 673 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 AMIGO1Q86WK6 493 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 OR52E4Q8NGH9 312 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 IGSF8Q969P0 613 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 PRAP1Q96NZ9 151 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 FRG2BQ96QU4 278 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 RAB6CQ9H0N0 254 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 P2RX2Q9UBL9 471 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 GPRC6AQ5T6X5 926 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 P2RY8Q86VZ1 359 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 NLGN4XQ8N0W4 816 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 RFKQ969G6 155 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 POLR2J3Q9H1A7 115 aaKnown RBP16.68■□□□□ 0.26
MCF2L-203ENST00000375604 B4GALT6Q9UBX8 382 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 SNX7Q9UNH6 387 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 MON2Q7Z3U7 1717 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 SOD2P04179 222 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 HEXBP07686 556 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 GALTP07902 379 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 FAUP35544 74 aaKnown RBP16.68■□□□□ 0.26
MCF2L-203ENST00000375604 PRMT2P55345 433 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 GMFBP60983 142 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 E2F2Q14209 437 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 BRAT1Q6PJG6 821 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 PXYLP1Q8TE99 480 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 NTAN1Q96AB6 310 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 ZDHHC18Q9NUE0 388 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 J3QLW9 94 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 ZNF19P17023 458 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 CSNK2A2P19784 350 aaPredicted RBP16.68■□□□□ 0.26
MCF2L-203ENST00000375604 APLP1P51693 650 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 OR12D2P58182 307 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 PRKD1Q15139 912 aaPredicted RBP16.68■□□□□ 0.26
MCF2L-203ENST00000375604 ASB18Q6ZVZ8 466 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 GKN2Q86XP6 184 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 RNF130Q86XS8 419 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 RAB8BQ92930 207 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 CMTM7Q96FZ5 175 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 SPATA6Q9NWH7 488 aaPredicted RBP16.68■□□□□ 0.26
MCF2L-203ENST00000375604 PARPBPQ9NWS1 579 aa16.68■□□□□ 0.26
MCF2L-203ENST00000375604 SPIN1Q9Y657 262 aaPredicted RBP16.68■□□□□ 0.26
MCF2L-203ENST00000375604 RAP2AP10114 183 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms