RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 IRAK1BP1Q5VVH5 260 aa13.55□□□□□ -0.24
NELFE-201ENST00000375425 ATG9BQ674R7 924 aa13.55□□□□□ -0.24
NELFE-201ENST00000375425 IGFL2Q6UWQ7 119 aa13.55□□□□□ -0.24
NELFE-201ENST00000375425 UBE2R2Q712K3 238 aaPredicted RBP13.55□□□□□ -0.24
NELFE-201ENST00000375425 ADCK2Q7Z695 626 aa13.55□□□□□ -0.24
NELFE-201ENST00000375425 KCNMB4Q86W47 210 aa13.55□□□□□ -0.24
NELFE-201ENST00000375425 LRRC56Q8IYG6 542 aaPredicted RBP13.55□□□□□ -0.24
NELFE-201ENST00000375425 CPNE9Q8IYJ1 553 aa13.55□□□□□ -0.24
NELFE-201ENST00000375425 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.55□□□□□ -0.24
NELFE-201ENST00000375425 DNAJB14Q8TBM8 379 aa13.55□□□□□ -0.24
NELFE-201ENST00000375425 SSC4DQ8WTU2 575 aa13.55□□□□□ -0.24
NELFE-201ENST00000375425 RERGQ96A58 199 aaPredicted RBP13.55□□□□□ -0.24
NELFE-201ENST00000375425 C8orf44Q96CB5 159 aa13.55□□□□□ -0.24
NELFE-201ENST00000375425 MVB12AQ96EY5 273 aa13.55□□□□□ -0.24
NELFE-201ENST00000375425 MMABQ96EY8 250 aaPredicted RBP13.55□□□□□ -0.24
NELFE-201ENST00000375425 AARSD1Q9BTE6 412 aaKnown RBP13.55□□□□□ -0.24
NELFE-201ENST00000375425 COPG1Q9Y678 874 aaKnown RBP13.55□□□□□ -0.24
NELFE-201ENST00000375425 H7BY64 318 aa13.54□□□□□ -0.24
NELFE-201ENST00000375425 FFAR3O14843 346 aa13.54□□□□□ -0.24
NELFE-201ENST00000375425 HAT1O14929 419 aa13.54□□□□□ -0.24
NELFE-201ENST00000375425 GPR42O15529 346 aa13.54□□□□□ -0.24
NELFE-201ENST00000375425 ACPPP15309 386 aa13.54□□□□□ -0.24
NELFE-201ENST00000375425 EZRP15311 586 aaKnown RBP13.54□□□□□ -0.24
NELFE-201ENST00000375425 IMPA1P29218 277 aa13.54□□□□□ -0.24
NELFE-201ENST00000375425 SLC26A3P40879 764 aa13.54□□□□□ -0.24
NELFE-201ENST00000375425 RELAQ04206 551 aa13.54□□□□□ -0.24
NELFE-201ENST00000375425 DSG2Q14126 1118 aa13.54□□□□□ -0.24
NELFE-201ENST00000375425 GARNL3Q5VVW2 1013 aa13.54□□□□□ -0.24
NELFE-201ENST00000375425 PIWIL4Q7Z3Z4 852 aaKnown RBP13.54□□□□□ -0.24
NELFE-201ENST00000375425 PLD3Q8IV08 490 aa13.54□□□□□ -0.24
NELFE-201ENST00000375425 PPP4R1Q8TF05 950 aa13.54□□□□□ -0.24
NELFE-201ENST00000375425 PRAP1Q96NZ9 151 aa13.54□□□□□ -0.24
NELFE-201ENST00000375425 EBNA1BP2Q99848 306 aaKnown RBP13.54□□□□□ -0.24
NELFE-201ENST00000375425 WDR77Q9BQA1 342 aaPredicted RBP13.54□□□□□ -0.24
NELFE-201ENST00000375425 FAM167BQ9BTA0 163 aa13.54□□□□□ -0.24
NELFE-201ENST00000375425 ZNF160Q9HCG1 818 aa13.54□□□□□ -0.24
NELFE-201ENST00000375425 CUEDC1Q9NWM3 386 aaPredicted RBP13.54□□□□□ -0.24
NELFE-201ENST00000375425 TRPC4Q9UBN4 977 aa13.54□□□□□ -0.24
NELFE-201ENST00000375425 PCYOX1Q9UHG3 505 aa13.54□□□□□ -0.24
NELFE-201ENST00000375425 SNX12Q9UMY4 172 aa13.54□□□□□ -0.24
NELFE-201ENST00000375425 PCDHGA10Q9Y5H3 936 aa13.54□□□□□ -0.24
NELFE-201ENST00000375425 A0A0A6YYC8 382 aaPredicted RBP13.53□□□□□ -0.24
NELFE-201ENST00000375425 IDSB3KWA1 339 aa13.53□□□□□ -0.24
NELFE-201ENST00000375425 I3L1I5 382 aaPredicted RBP13.53□□□□□ -0.24
NELFE-201ENST00000375425 CES2O00748 559 aa13.53□□□□□ -0.24
NELFE-201ENST00000375425 TXNDC9O14530 226 aa13.53□□□□□ -0.24
NELFE-201ENST00000375425 MAP2K7O14733 419 aa13.53□□□□□ -0.24
NELFE-201ENST00000375425 PRPF4O43172 522 aaKnown RBP eCLIP13.53□□□□□ -0.24
NELFE-201ENST00000375425 ZSCAN12O43309 604 aa13.53□□□□□ -0.24
NELFE-201ENST00000375425 FOXS1O43638 330 aa13.53□□□□□ -0.24
NELFE-201ENST00000375425 HPP00738 406 aa13.53□□□□□ -0.24
NELFE-201ENST00000375425 PGAM1P18669 254 aa13.53□□□□□ -0.24
NELFE-201ENST00000375425 GABRB3P28472 473 aa13.53□□□□□ -0.24
NELFE-201ENST00000375425 EMP2P54851 167 aa13.53□□□□□ -0.24
NELFE-201ENST00000375425 TIAL1Q01085 375 aaKnown RBP eCLIP13.53□□□□□ -0.24
NELFE-201ENST00000375425 DHX9Q08211 1270 aaKnown RBP13.53□□□□□ -0.24
NELFE-201ENST00000375425 PTK6Q13882 451 aa13.53□□□□□ -0.24
NELFE-201ENST00000375425 CRYMQ14894 314 aa13.53□□□□□ -0.24
NELFE-201ENST00000375425 UGT3A1Q6NUS8 523 aa13.53□□□□□ -0.24
NELFE-201ENST00000375425 NDUFAF7Q7L592 441 aa13.53□□□□□ -0.24
NELFE-201ENST00000375425 ARHGEF39Q8N4T4 335 aa13.53□□□□□ -0.24
NELFE-201ENST00000375425 C2CD4AQ8NCU7 369 aaPredicted RBP13.53□□□□□ -0.24
NELFE-201ENST00000375425 MCOLN3Q8TDD5 553 aa13.53□□□□□ -0.24
NELFE-201ENST00000375425 EEF1AKMT1Q8WVE0 214 aa13.53□□□□□ -0.24
NELFE-201ENST00000375425 NDNQ99608 321 aa13.53□□□□□ -0.24
NELFE-201ENST00000375425 BARD1Q99728 777 aaKnown RBP13.53□□□□□ -0.24
NELFE-201ENST00000375425 TRMT1Q9NXH9 659 aaKnown RBP13.53□□□□□ -0.24
NELFE-201ENST00000375425 TRMT6Q9UJA5 497 aaKnown RBP13.53□□□□□ -0.24
NELFE-201ENST00000375425 NOVA2Q9UNW9 492 aaKnown RBP13.53□□□□□ -0.24
NELFE-201ENST00000375425 NTNG1Q9Y2I2 539 aa13.53□□□□□ -0.24
NELFE-201ENST00000375425 PCM1Q15154 2024 aa13.53□□□□□ -0.24
NELFE-201ENST00000375425 SPTAN1Q13813 2472 aaKnown RBP13.52□□□□□ -0.24
NELFE-201ENST00000375425 ANKUB1A6NFN9 424 aa13.52□□□□□ -0.25
NELFE-201ENST00000375425 EIF3FO00303 357 aaPredicted RBP13.52□□□□□ -0.25
NELFE-201ENST00000375425 DNALI1O14645 258 aaPredicted RBP13.52□□□□□ -0.25
NELFE-201ENST00000375425 P2RX6O15547 441 aa13.52□□□□□ -0.25
NELFE-201ENST00000375425 BANF1O75531 89 aa13.52□□□□□ -0.25
NELFE-201ENST00000375425 KLHL18O94889 574 aa13.52□□□□□ -0.25
NELFE-201ENST00000375425 AHSGP02765 367 aa13.52□□□□□ -0.25
NELFE-201ENST00000375425 HEXBP07686 556 aa13.52□□□□□ -0.25
NELFE-201ENST00000375425 ANXA5P08758 320 aa13.52□□□□□ -0.25
NELFE-201ENST00000375425 RNF224P0DH78 156 aa13.52□□□□□ -0.25
NELFE-201ENST00000375425 FAM53BQ14153 422 aa13.52□□□□□ -0.25
NELFE-201ENST00000375425 MSS51Q4VC12 460 aa13.52□□□□□ -0.25
NELFE-201ENST00000375425 C4orf17Q53FE4 359 aa13.52□□□□□ -0.25
NELFE-201ENST00000375425 FAAH2Q6GMR7 532 aa13.52□□□□□ -0.25
NELFE-201ENST00000375425 ISLR2Q6UXK2 745 aa13.52□□□□□ -0.25
NELFE-201ENST00000375425 LINC00696Q6ZRV3 163 aa13.52□□□□□ -0.25
NELFE-201ENST00000375425 PCGF5Q86SE9 256 aa13.52□□□□□ -0.25
NELFE-201ENST00000375425 AMER3Q8N944 861 aa13.52□□□□□ -0.25
NELFE-201ENST00000375425 CNDP1Q96KN2 507 aa13.52□□□□□ -0.25
NELFE-201ENST00000375425 CCDC138Q96M89 665 aa13.52□□□□□ -0.25
NELFE-201ENST00000375425 LMF1Q96S06 567 aa13.52□□□□□ -0.25
NELFE-201ENST00000375425 TGIF2Q9GZN2 237 aa13.52□□□□□ -0.25
NELFE-201ENST00000375425 DRC3Q9H069 523 aa13.52□□□□□ -0.25
NELFE-201ENST00000375425 DDX47Q9H0S4 455 aaKnown RBP13.52□□□□□ -0.25
NELFE-201ENST00000375425 EPS8L2Q9H6S3 715 aa13.52□□□□□ -0.25
NELFE-201ENST00000375425 MKKSQ9NPJ1 570 aaPredicted RBP13.52□□□□□ -0.25
NELFE-201ENST00000375425 TMEM184CQ9NVA4 438 aa13.52□□□□□ -0.25
NELFE-201ENST00000375425 TAS2R13Q9NYV9 303 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms