RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 ACP6Q9NPH0 428 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 CD300AQ9UGN4 299 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 ANKRD33BA6NCL7 494 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 H1F0P07305 194 aaKnown RBP14.9□□□□□ -0.02
COL5A1-201ENST00000371817 HOXD8P13378 290 aaPredicted RBP14.9□□□□□ -0.02
COL5A1-201ENST00000371817 DCBLD1Q8N8Z6 715 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 RIT1Q92963 219 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 ADAD1Q96M93 576 aaKnown RBP14.9□□□□□ -0.02
COL5A1-201ENST00000371817 VRK1Q99986 396 aaPredicted RBP14.9□□□□□ -0.02
COL5A1-201ENST00000371817 VPS25Q9BRG1 176 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 PNPLA6Q8IY17 1366 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 SMIM30A4D0T7 59 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 NUPL2O15504 423 aaKnown RBP14.9□□□□□ -0.02
COL5A1-201ENST00000371817 PGLYRP2Q96PD5 576 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 BCAS2O75934 225 aaPredicted RBP14.9□□□□□ -0.02
COL5A1-201ENST00000371817 SPDEFO95238 335 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 AHCYP23526 432 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 CDK2P24941 298 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 SLC6A9P48067 706 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 VEGFCP49767 419 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 ZNF792Q3KQV3 632 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 FAM110BQ8TC76 370 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 POT1Q9NUX5 634 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 PCDHB9Q9Y5E1 797 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 KNTC1P50748 2209 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 ENTPD3O75355 529 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 PROS1P07225 676 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 FOXN2P32314 431 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 RHBDF2Q6PJF5 856 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 COX18Q8N8Q8 333 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 SLC22A8Q8TCC7 542 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 LGALS12Q96DT0 336 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 SLC6A7Q99884 636 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 CHRNB2P17787 502 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 HSPA7P48741 367 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 MLLT1Q03111 559 aaPredicted RBP14.89□□□□□ -0.03
COL5A1-201ENST00000371817 GPRC5AQ8NFJ5 357 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 EN1Q05925 392 aaPredicted RBP14.89□□□□□ -0.03
COL5A1-201ENST00000371817 ZDHHC20Q5W0Z9 365 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 C3orf33Q6P1S2 294 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 BEND7Q8N7W2 519 aaPredicted RBP14.89□□□□□ -0.03
COL5A1-201ENST00000371817 HBEGFQ99075 208 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 MAPKAP1Q9BPZ7 522 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 ABCG5Q9H222 651 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 GXYLT2A0PJZ3 443 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 E7EQ34 232 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 SHOXO15266 292 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 RPP14O95059 124 aaKnown RBP14.89□□□□□ -0.03
COL5A1-201ENST00000371817 HCKP08631 526 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 GLP1RP43220 463 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 SLC18A1P54219 525 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 WNT3AP56704 352 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 HERVK_113P63132 956 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 BCL2L15Q5TBC7 163 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 PARK7Q99497 189 aaKnown RBP14.89□□□□□ -0.03
COL5A1-201ENST00000371817 ERVK-6Q9BXR3 956 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 CHRNA1P02708 482 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 BCKDHAP12694 445 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 CAPZA1P52907 286 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 CDC42EP5Q6NZY7 148 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 C7orf57Q8NEG2 295 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 KATNBL1Q9H079 304 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 PIM2Q9P1W9 311 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 AP1M2Q9Y6Q5 423 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 CHD5Q8TDI0 1954 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 PROM1O43490 865 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 ZDHHC11BP0C7U3 371 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 NRIP1P48552 1158 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 ALKBH2Q6NS38 261 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 DNM1P34Q6PK57 102 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 OTOP1Q7RTM1 612 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 VNN3Q9NY84 501 aa14.89□□□□□ -0.03
COL5A1-201ENST00000371817 CTHP32929 405 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 HTRA4P83105 476 aaPredicted RBP14.88□□□□□ -0.03
COL5A1-201ENST00000371817 CDK18Q07002 472 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 TEX44Q53QW1 395 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 RNF180Q86T96 592 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 TXNRD3Q86VQ6 643 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 SKA3Q8IX90 412 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 SLC22A15Q8IZD6 547 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 SNX10Q9Y5X0 201 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 A0A1B0GVM2 712 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 TRAPPC13A5PLN9 417 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 SLITRK3O94933 977 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 TGFB3P10600 412 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 ZNF16P17020 682 aaPredicted RBP14.88□□□□□ -0.03
COL5A1-201ENST00000371817 CRISP3P54108 245 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 SNTB2Q13425 540 aaKnown RBP14.88□□□□□ -0.03
COL5A1-201ENST00000371817 GSG1LQ6UXU4 331 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 FTMTQ8N4E7 242 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 OR56B2PQ8NGI1 322 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 CORO1BQ9BR76 489 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 GATA5Q9BWX5 397 aaPredicted RBP14.88□□□□□ -0.03
COL5A1-201ENST00000371817 ABCG4Q9H172 646 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 TUBB1Q9H4B7 451 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 ZNF670-ZNF695F2Z2N8 137 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 BHLHE40O14503 412 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 RHOP08100 348 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 SOX10P56693 466 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 LIPKQ5VXJ0 399 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms