RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 NSMCE4AQ9NXX6 385 aa18.08■□□□□ 0.48
CKS1B-203ENST00000368439 TCRBV9S1A1TA0A576 114 aa18.07■□□□□ 0.48
CKS1B-203ENST00000368439 FAM159BA6NKW6 160 aa18.07■□□□□ 0.48
CKS1B-203ENST00000368439 WISP3O95389 354 aaPredicted RBP18.07■□□□□ 0.48
CKS1B-203ENST00000368439 EIF2S1P05198 315 aaKnown RBP18.07■□□□□ 0.48
CKS1B-203ENST00000368439 OTX2P32243 289 aa18.07■□□□□ 0.48
CKS1B-203ENST00000368439 CAV1Q03135 178 aa18.07■□□□□ 0.48
CKS1B-203ENST00000368439 CKAP4Q07065 602 aaKnown RBP18.07■□□□□ 0.48
CKS1B-203ENST00000368439 NAE1Q13564 534 aa18.07■□□□□ 0.48
CKS1B-203ENST00000368439 NKG7Q16617 165 aa18.07■□□□□ 0.48
CKS1B-203ENST00000368439 PPP1R3AQ16821 1122 aa18.07■□□□□ 0.48
CKS1B-203ENST00000368439 HKDC1Q2TB90 917 aa18.07■□□□□ 0.48
CKS1B-203ENST00000368439 THEMIS2Q5TEJ8 643 aa18.07■□□□□ 0.48
CKS1B-203ENST00000368439 MED25Q71SY5 747 aa18.07■□□□□ 0.48
CKS1B-203ENST00000368439 PRICKLE2Q7Z3G6 844 aa18.07■□□□□ 0.48
CKS1B-203ENST00000368439 PPP1R32Q7Z5V6 425 aa18.07■□□□□ 0.48
CKS1B-203ENST00000368439 MRGPREQ86SM8 312 aa18.07■□□□□ 0.48
CKS1B-203ENST00000368439 PLD3Q8IV08 490 aa18.07■□□□□ 0.48
CKS1B-203ENST00000368439 METTL27Q8N6F8 245 aaPredicted RBP18.07■□□□□ 0.48
CKS1B-203ENST00000368439 OR56A3Q8NH54 315 aa18.07■□□□□ 0.48
CKS1B-203ENST00000368439 ANKRD49Q8WVL7 239 aa18.07■□□□□ 0.48
CKS1B-203ENST00000368439 VPS39Q96JC1 886 aa18.07■□□□□ 0.48
CKS1B-203ENST00000368439 LRRC1Q9BTT6 524 aa18.07■□□□□ 0.48
CKS1B-203ENST00000368439 WDR54Q9H977 334 aa18.07■□□□□ 0.48
CKS1B-203ENST00000368439 ACSS2Q9NR19 701 aa18.07■□□□□ 0.48
CKS1B-203ENST00000368439 TMEM184CQ9NVA4 438 aa18.07■□□□□ 0.48
CKS1B-203ENST00000368439 UTP6Q9NYH9 597 aaKnown RBP18.07■□□□□ 0.48
CKS1B-203ENST00000368439 RUVBL1Q9Y265 456 aaKnown RBP18.07■□□□□ 0.48
CKS1B-203ENST00000368439 HEMK1Q9Y5R4 338 aaPredicted RBP18.07■□□□□ 0.48
CKS1B-203ENST00000368439 TENM4Q6N022 2769 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 VSTM2BA6NLU5 285 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 P2RX6O15547 441 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 ENO2P09104 434 aaPredicted RBP18.06■□□□□ 0.48
CKS1B-203ENST00000368439 GSTA2P09210 222 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 HIST1H2AGP0C0S8 130 aaPredicted RBP18.06■□□□□ 0.48
CKS1B-203ENST00000368439 PIM1P11309 404 aaPredicted RBP18.06■□□□□ 0.48
CKS1B-203ENST00000368439 NPPBP16860 134 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 HIST1H2ADP20671 130 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 SAT1P21673 171 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 HRH2P25021 359 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 CCL11P51671 97 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 AP1S2P56377 157 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 SNRPNP63162 240 aaKnown RBP18.06■□□□□ 0.48
CKS1B-203ENST00000368439 CSNK1G2P78368 415 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 SLC7A5Q01650 507 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 GUCY2DQ02846 1103 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 MUM1Q2TAK8 710 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 LCTLQ6UWM7 567 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 C3orf62Q6ZUJ4 267 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 CSNK1A1LQ8N752 337 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 TMEM102Q8N9M5 508 aaPredicted RBP18.06■□□□□ 0.48
CKS1B-203ENST00000368439 ANKRD7Q92527 254 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 FBXL8Q96CD0 374 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 HIST1H2AHQ96KK5 128 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 HIST1H2AJQ99878 128 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 H2AFJQ9BTM1 129 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 PCBD2Q9H0N5 130 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 POPDC3Q9HBV1 291 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 ZNF304Q9HCX3 659 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 ZDHHC18Q9NUE0 388 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 CTSFQ9UBX1 484 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 NOVA2Q9UNW9 492 aaKnown RBP18.06■□□□□ 0.48
CKS1B-203ENST00000368439 MTO1Q9Y2Z2 717 aaKnown RBP18.06■□□□□ 0.48
CKS1B-203ENST00000368439 PCDHGA9Q9Y5G4 932 aaKnown RBP18.06■□□□□ 0.48
CKS1B-203ENST00000368439 MAU2Q9Y6X3 613 aa18.06■□□□□ 0.48
CKS1B-203ENST00000368439 KCNE1BA0A087WTH5 132 aa18.05■□□□□ 0.48
CKS1B-203ENST00000368439 ESYT3A0FGR9 886 aa18.05■□□□□ 0.48
CKS1B-203ENST00000368439 J3QKU1 62 aa18.05■□□□□ 0.48
CKS1B-203ENST00000368439 CDC7O00311 574 aa18.05■□□□□ 0.48
CKS1B-203ENST00000368439 URI1O94763 535 aaPredicted RBP18.05■□□□□ 0.48
CKS1B-203ENST00000368439 CCND1P24385 295 aa18.05■□□□□ 0.48
CKS1B-203ENST00000368439 WHAMMP3Q1A5X7 153 aa18.05■□□□□ 0.48
CKS1B-203ENST00000368439 PRMT9Q6P2P2 845 aa18.05■□□□□ 0.48
CKS1B-203ENST00000368439 ATG14Q6ZNE5 492 aa18.05■□□□□ 0.48
CKS1B-203ENST00000368439 VN1R4Q7Z5H5 301 aa18.05■□□□□ 0.48
CKS1B-203ENST00000368439 ADCK2Q7Z695 626 aa18.05■□□□□ 0.48
CKS1B-203ENST00000368439 NKAPQ8N5F7 415 aaKnown RBP18.05■□□□□ 0.48
CKS1B-203ENST00000368439 IP6K3Q96PC2 410 aa18.05■□□□□ 0.48
CKS1B-203ENST00000368439 OR4K3Q96R72 315 aa18.05■□□□□ 0.48
CKS1B-203ENST00000368439 LRRC4CQ9HCJ2 640 aa18.05■□□□□ 0.48
CKS1B-203ENST00000368439 P4HTMQ9NXG6 502 aa18.05■□□□□ 0.48
CKS1B-203ENST00000368439 ARL15Q9NXU5 204 aa18.05■□□□□ 0.48
CKS1B-203ENST00000368439 DOCK10Q96BY6 2186 aa18.04■□□□□ 0.48
CKS1B-203ENST00000368439 IGLV3-12A0A075B6K2 115 aa18.04■□□□□ 0.48
CKS1B-203ENST00000368439 PYCARD-AS1I3L0S3 204 aa18.04■□□□□ 0.48
CKS1B-203ENST00000368439 FOXS1O43638 330 aa18.04■□□□□ 0.48
CKS1B-203ENST00000368439 MAGEA4P43358 317 aa18.04■□□□□ 0.48
CKS1B-203ENST00000368439 GARNL3Q5VVW2 1013 aa18.04■□□□□ 0.48
CKS1B-203ENST00000368439 CAPN13Q6MZZ7 669 aaPredicted RBP18.04■□□□□ 0.48
CKS1B-203ENST00000368439 C8orf74Q6P047 294 aa18.04■□□□□ 0.48
CKS1B-203ENST00000368439 ASB18Q6ZVZ8 466 aa18.04■□□□□ 0.48
CKS1B-203ENST00000368439 FDCSPQ8NFU4 85 aa18.04■□□□□ 0.48
CKS1B-203ENST00000368439 RERGQ96A58 199 aaPredicted RBP18.04■□□□□ 0.48
CKS1B-203ENST00000368439 NACC2Q96BF6 587 aa18.04■□□□□ 0.48
CKS1B-203ENST00000368439 PYCR2Q96C36 320 aa18.04■□□□□ 0.48
CKS1B-203ENST00000368439 MVB12AQ96EY5 273 aa18.04■□□□□ 0.48
CKS1B-203ENST00000368439 CABS1Q96KC9 395 aa18.04■□□□□ 0.48
CKS1B-203ENST00000368439 RBBP8Q99708 897 aa18.04■□□□□ 0.48
CKS1B-203ENST00000368439 CPNE1Q99829 537 aa18.04■□□□□ 0.48
CKS1B-203ENST00000368439 SLC25A23Q9BV35 468 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms