RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 GAL3ST3Q96A11 431 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 CMTM7Q96FZ5 175 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 SMURF1Q9HCE7 757 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 B4GALT6Q9UBX8 382 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 PIAS3Q9Y6X2 628 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 RNF13O43567 381 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 SLC10A3P09131 477 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 ALDH3A2P51648 485 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 XRN1Q8IZH2 1706 aaKnown RBP19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 C1orf216Q8TAB5 229 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 OR1F2PQ96R84 312 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 RNPEPL1Q9HAU8 725 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 FADS3Q9Y5Q0 445 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 MID1O15344 667 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 ITM2AO43736 263 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 DIRAS1O95057 198 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 TNFRSF8P28908 595 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 ENTPD1P49961 510 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 RASGEF1BQ0VAM2 473 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 RBM20Q5T481 1227 aaKnown RBP19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 PRPF38BQ5VTL8 546 aaKnown RBP19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 B3GNT6Q6ZMB0 384 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 LRRC17Q8N6Y2 441 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 CAPN8A6NHC0 703 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 E7EQ34 232 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 H7C0S8 307 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 SOX1O00570 391 aaPredicted RBP19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 TGM5O43548 720 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 NADKO95544 446 aaPredicted RBP19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 GLDCP23378 1020 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 CSTF1Q05048 431 aaKnown RBP19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 OGFOD2Q6N063 350 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 HSDL2Q6YN16 418 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 BEND4Q6ZU67 534 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 GOLGA7Q7Z5G4 137 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 DNAAF1Q8NEP3 725 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 SORCS3Q9UPU3 1222 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 Q9Y3F1 56 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 FMN2Q9NZ56 1722 aa19.74■□□□□ 0.75
CDC42BPB-201ENST00000361246 SYNGR4O95473 234 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 PRAMEF12O95522 483 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 ITGA5P08648 1049 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 CASP6P55212 293 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 OLR1P78380 273 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 DPYSL2Q16555 572 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 C19orf25Q9UFG5 118 aaPredicted RBP19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 VSTM5A8MXK1 200 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 DSTNP60981 165 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 MLLT1Q03111 559 aaPredicted RBP19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 DNASE1L3Q13609 305 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 FOXRED2Q8IWF2 684 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 FAM3CQ92520 227 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 ZNF514Q96K75 400 aaPredicted RBP19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 CHID1Q9BWS9 393 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 CHD4Q14839 1912 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 SPEF2Q9C093 1822 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 CXorf49A8MYA2 514 aaPredicted RBP19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 OR1I1O60431 355 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 EDF1O60869 148 aaKnown RBP19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 YIPF7Q8N8F6 280 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 RBM15BQ8NDT2 890 aaKnown RBP19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 ZDHHC12Q96GR4 267 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 HCFC1R1Q9NWW0 138 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 GALPQ9UBC7 116 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 P2RX2Q9UBL9 471 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 BEST1O76090 585 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 KLHL26Q53HC5 615 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 DIRAS2Q96HU8 199 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 OSBPL11Q9BXB4 747 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 CLK4Q9HAZ1 481 aaKnown RBP19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 APOBEC3BQ9UH17 382 aaKnown RBP19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 SEC14L5O43304 696 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 ZNF3P17036 446 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 LCN1P1Q5VSP4 162 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 ERN2Q76MJ5 926 aaKnown RBP19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 NSMCE3Q96MG7 304 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 SLC32A1Q9H598 525 aa19.73■□□□□ 0.75
CDC42BPB-201ENST00000361246 GP1BBP13224 206 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 OGNP20774 298 aaKnown RBP19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 SLC3A1Q07837 685 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 RHBDD1Q8TEB9 315 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 WDR60Q8WVS4 1066 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 ZFP3Q96NJ6 502 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 PCDHGB5Q9Y5G0 923 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 ZNF878C9JN71 531 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 SLC7A4O43246 635 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 RGS10O43665 173 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 ZNF806P0C7X5 589 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 CCDC116Q8IYX3 515 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 PTCHD1Q96NR3 888 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 LGR4Q9BXB1 951 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 CLPXO76031 633 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 AOC1P19801 751 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 MTTPP55157 894 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 DEFB110Q30KQ9 67 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 CRB2Q5IJ48 1285 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 TMEM198Q66K66 360 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 ZNF101Q8IZC7 436 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 RASGEF1CQ8N431 466 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 ZNF615Q8N8J6 731 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms