RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 OTCP00480 354 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 EBLN1P0CF75 366 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 THRAP10827 490 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 CDH1P12830 882 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 PVRP15151 417 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 ST6GAL1P15907 406 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 TSPAN8P19075 237 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 MAGP20916 626 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 MPSTP25325 297 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 ARRB2P32121 409 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 CCR10P46092 362 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 CCR8P51685 355 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 SH3BP2P78314 561 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 CSNK1G2P78368 415 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 INSM1Q01101 510 aaPredicted RBP11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 IRF8Q02556 426 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 RELAQ04206 551 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 TRAF3Q13114 568 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 CHIT1Q13231 466 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 STX3Q13277 289 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 SPIDRQ14159 915 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 DOC2AQ14183 400 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 RCN2Q14257 317 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 NAA25Q14CX7 972 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 ARL13AQ5H913 290 aaPredicted RBP11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 CACHD1Q5VU97 1274 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 CDCP2Q5VXM1 449 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 FCRL6Q6DN72 434 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 ATG14Q6ZNE5 492 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 ARHGAP22Q7Z5H3 698 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 PAQR7Q86WK9 346 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 FAM129CQ86XR2 697 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 SLITRK4Q8IW52 837 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 L3MBTL4Q8NA19 623 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 OR52B6Q8NGF0 335 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 PPP1R14CQ8TAE6 165 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 KLHL6Q8WZ60 621 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 ATP6V1E2Q96A05 226 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 PRAP1Q96NZ9 151 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 ZNF382Q96SR6 550 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 PLCD4Q9BRC7 762 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 ZNF225Q9UK10 706 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 STK38LQ9Y2H1 464 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 KLHL20Q9Y2M5 609 aa11.92□□□□□ -0.5
NIF3L1-201ENST00000359683 A0A1B0GTL3 188 aa11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 OR2A25A4D2G3 310 aa11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 SLC9B1P1A6NJY1 282 aa11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 ITM2AO43736 263 aa11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 ZBTB11O95625 1053 aaPredicted RBP11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 ANKRD34CP0C6C1 535 aa11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 FTH1P19P0C7X4 201 aa11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 CD22P20273 847 aa11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 VARSP26640 1264 aaKnown RBP11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 CCNG1P51959 295 aa11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 PKNOX1P55347 436 aa11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 ABCE1P61221 599 aaKnown RBP11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 BST1Q10588 318 aa11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 FOXC1Q12948 553 aa11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 ZIC1Q15915 447 aa11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 XKR6Q5GH73 641 aa11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 LIPJQ5W064 366 aa11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 ATG16L1Q676U5 607 aa11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 FBXO42Q6P3S6 717 aa11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 MILR1Q7Z6M3 343 aa11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 TMPRSS11BQ86T26 416 aa11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 KMT5CQ86Y97 462 aa11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 DYDC1Q8WWB3 177 aa11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 PTCD3Q96EY7 689 aaKnown RBP11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 MAGEB18Q96M61 343 aa11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 SARGQ9BW04 601 aa11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 C20orf27Q9GZN8 174 aa11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 SYNDIG1Q9H7V2 258 aa11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 KLHL3Q9UH77 587 aa11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 APOBEC2Q9Y235 224 aaKnown RBP11.91□□□□□ -0.5
NIF3L1-201ENST00000359683 COL27A1Q8IZC6 1860 aaPredicted RBP11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 PRAMEF10O60809 474 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 SNNO75324 88 aaPredicted RBP11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 RASSF9O75901 435 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 SNUPNO95149 360 aaKnown RBP11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 CLDN9O95484 217 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 ESRRBO95718 433 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 CHRNGP07510 517 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 MDH1P40925 334 aaKnown RBP11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 HNF4AP41235 474 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 SLC1A6P48664 564 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 ERVPABLB-1P60509 514 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 SIM1P81133 766 aaPredicted RBP11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 LAPTM5Q13571 262 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 TRA2AQ13595 282 aaKnown RBP eCLIP11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 RBBP7Q16576 425 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 GGTA1PQ4G0N0 100 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 CCDC157Q569K6 752 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 SNAP47Q5SQN1 464 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 RBM44Q6ZP01 1051 aaKnown RBP11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 RGS9BPQ6ZS82 235 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 GPRIN3Q6ZVF9 776 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 SYVN1Q86TM6 617 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 C19orf47Q8N9M1 422 aaKnown RBP11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 OR4F6Q8NGB9 312 aa11.9□□□□□ -0.5
NIF3L1-201ENST00000359683 AGAP11Q8TF27 550 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms