RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 ASIC3Q9UHC3 531 aa1.76□□□□□ -2.13
SMARCAD1-202ENST00000359052 POLDIP2Q9Y2S7 368 aa1.76□□□□□ -2.13
SMARCAD1-202ENST00000359052 KIF3AQ9Y496 699 aa1.76□□□□□ -2.13
SMARCAD1-202ENST00000359052 SNX13Q9Y5W8 968 aa1.76□□□□□ -2.13
SMARCAD1-202ENST00000359052 SF3B1O75533 1304 aaKnown RBP eCLIP1.76□□□□□ -2.136e-6■■■■■ 93.6
SMARCAD1-202ENST00000359052 SHROOM3Q8TF72 1996 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 FAM237BA0A1B0GVD1 139 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 OR6C75A6NL08 312 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 GNAT3A8MTJ3 354 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 EFNA2O43921 213 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 CST1P01037 141 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 C1QAP02745 245 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 CEACAM5P06731 702 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 STAG3L1P0CL83 205 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 EPCAMP16422 314 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 CD22P20273 847 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 LMO1P25800 156 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 AVPR1AP37288 418 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 TNFRSF4P43489 277 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 HCAR3P49019 387 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 GFPT1Q06210 699 aaPredicted RBP1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 ZIC1Q15915 447 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 SLC15A2Q16348 729 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 TMEM44Q2T9K0 475 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 MPPE1Q53F39 396 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 FIGLAQ6QHK4 219 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 GADL1Q6ZQY3 521 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 ARHGAP30Q7Z6I6 1101 aaPredicted RBP1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 PHLDB2Q86SQ0 1253 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 APLFQ8IW19 511 aaPredicted RBP1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 GLB1L2Q8IW92 636 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 MFN1Q8IWA4 741 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 CCAR2Q8N163 923 aaKnown RBP1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 ZNF565Q8N9K5 539 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 KCNH5Q8NCM2 988 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 CD101Q93033 1021 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 SGF29Q96ES7 293 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 SPATA13Q96N96 652 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 HSD17B14Q9BPX1 270 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 TRIM6Q9C030 488 aaPredicted RBP1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 DDX47Q9H0S4 455 aaKnown RBP1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 SLCO5A1Q9H2Y9 848 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 EXO5Q9H790 373 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 METTL7AQ9H8H3 244 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 FOXJ3Q9UPW0 622 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 STK36Q9NRP7 1315 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 EML5Q05BV3 1969 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 SCN5AQ14524 2016 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 A0A0G2JNJ9 132 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 ATP6AP2A0A1C7CYW4 349 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 ANKRD66B4E2M5 251 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 SDHDO14521 159 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 RRHO14718 337 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 SMAD9O15198 467 aaKnown RBP1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 FCGR2AP12318 317 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 ST8SIA6P61647 398 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 SRSF5Q13243 272 aaKnown RBP1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 PTPRCAPQ14761 206 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 TMEM119Q4V9L6 283 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 GLE1Q53GS7 698 aaKnown RBP1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 TEX44Q53QW1 395 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 RNASE12Q5GAN4 147 aaKnown RBP1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 LCE1DQ5T752 114 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 TFAP2DQ7Z6R9 452 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 RSPH3Q86UC2 560 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 WFDC8Q8IUA0 241 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 PQLC1Q8N2U9 271 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 ZBTB2Q8N680 514 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 TEX45Q8NA69 505 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 CADM4Q8NFZ8 388 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 ATP8B4Q8TF62 1192 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 AENQ8WTP8 325 aaKnown RBP1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 CHPT1Q8WUD6 406 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 WASF1Q92558 559 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 SLC7A6OSQ96CW6 309 aaPredicted RBP1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 THOC1Q96FV9 657 aaKnown RBP1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 FBXL20Q96IG2 436 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 MGME1Q9BQP7 344 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 CCDC28BQ9BUN5 200 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 HDHD5Q9BXW7 423 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 RSPO3Q9BXY4 272 aaPredicted RBP1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 CRNKL1Q9BZJ0 848 aaKnown RBP1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 KLHL4Q9C0H6 718 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 C7orf69Q9H7B7 122 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 IMPACTQ9P2X3 320 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 Q9UFV3 132 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 IL20RAQ9UHF4 553 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 FBXW11Q9UKB1 542 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 TSPAN16Q9UKR8 245 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 AP4E1Q9UPM8 1137 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 DLGAP4Q9Y2H0 992 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 HBS1LQ9Y450 684 aaKnown RBP1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 FLT4P35916 1363 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 RTL9Q8NET4 1388 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 KMT2BQ9UMN6 2715 aaPredicted RBP1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 UQCRHLA0A096LP55 91 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 A0A1B0GTQ1 180 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 HMX2A2RU54 273 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 OR2M5A3KFT3 312 aa1.75□□□□□ -2.13
SMARCAD1-202ENST00000359052 DUXAA6NLW8 204 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms