RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 GRID2O43424 1007 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 KIAA0513O60268 411 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 FOXD2O60548 495 aaPredicted RBP8.55□□□□□ -1.04
COL6A6-201ENST00000358511 MT-CYBP00156 380 aaPredicted RBP8.55□□□□□ -1.04
COL6A6-201ENST00000358511 KCNA5P22460 613 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 UQCRC1P31930 480 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 BMXP51813 675 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 NFKB2Q00653 900 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 FAM189A2Q15884 450 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 UGCGQ16739 394 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 SCGB2B2Q4G0G5 96 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 CLEC12AQ5QGZ9 265 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 ANKRD54Q6NXT1 300 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 CCDC54Q8NEL0 328 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 OR6K6Q8NGW6 343 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 MTG2Q9H4K7 406 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 LOC100509620A0A075B734 347 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 COQ9O75208 318 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 BMP2P12643 396 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 HSPB3Q12988 150 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 LIPKQ5VXJ0 399 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 SLC15A3Q8IY34 581 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 CHPT1Q8WUD6 406 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 TP63Q9H3D4 680 aaPredicted RBP8.55□□□□□ -1.04
COL6A6-201ENST00000358511 TLE6Q9H808 572 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 STUB1Q9UNE7 303 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 GIMD1P0DJR0 217 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 HOXD8P13378 290 aaPredicted RBP8.55□□□□□ -1.04
COL6A6-201ENST00000358511 CFL1P23528 166 aaKnown RBP8.55□□□□□ -1.04
COL6A6-201ENST00000358511 CDKN2CP42773 168 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 RPP38P78345 283 aaKnown RBP8.55□□□□□ -1.04
COL6A6-201ENST00000358511 PPP2R2DQ66LE6 453 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 RAET1GQ6H3X3 334 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 MED27Q6P2C8 311 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 IGFN1Q86VF2 1251 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 TIFAQ96CG3 184 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 ENPP5Q9UJA9 477 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 SLIT2O94813 1529 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 FGF3P11487 239 aaPredicted RBP8.55□□□□□ -1.04
COL6A6-201ENST00000358511 VAMP1P23763 118 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 CHRNA5P30532 468 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 KCNAB2Q13303 367 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 KIAA1161Q6NSJ0 714 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 TMED4Q7Z7H5 227 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 DCP2Q8IU60 420 aaKnown RBP8.55□□□□□ -1.04
COL6A6-201ENST00000358511 NAT16Q8N8M0 369 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 GDPD1Q8N9F7 314 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 PRRG4Q9BZD6 226 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 BTBD1Q9H0C5 482 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 FAM118AQ9NWS6 357 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 KNTC1P50748 2209 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 TEX51A0A1B0GUA7 166 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 EEDO75530 441 aaKnown RBP8.55□□□□□ -1.04
COL6A6-201ENST00000358511 TOXO94900 526 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 GNALP38405 381 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 SPRED3Q2MJR0 410 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 RABL3Q5HYI8 236 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 PRSS48Q7RTY5 328 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 SPATA22Q8NHS9 363 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 TCTEX1D2Q8WW35 142 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 OR4K3Q96R72 315 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 HAPLN3Q96S86 360 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 B3GNT4Q9C0J1 378 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 MTFR1LQ9H019 292 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 OR51V1Q9H2C8 321 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 ZNF358Q9NW07 568 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 ZDHHC7Q9NXF8 308 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 SRRDQ9UH36 339 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 FZD4Q9ULV1 537 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 PCDHGB5Q9Y5G0 923 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 TSTD3H0UI37 97 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 CLDN5O00501 218 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 FFAR2O15552 330 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 DDX6P26196 483 aaKnown RBP eCLIP8.54□□□□□ -1.04
COL6A6-201ENST00000358511 ZNF132P52740 706 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 S100A10P60903 97 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 SLC22A10Q63ZE4 541 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 SLC30A6Q6NXT4 461 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 ARL9Q6T311 187 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 SNX20Q7Z614 316 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 GAB3Q8WWW8 586 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 UQCC2Q9BRT2 126 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 DPCDQ9BVM2 203 aaPredicted RBP8.54□□□□□ -1.04
COL6A6-201ENST00000358511 ITM2CQ9NQX7 267 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 DICER1Q9UPY3 1922 aaKnown RBP8.54□□□□□ -1.04
COL6A6-201ENST00000358511 NALCNQ8IZF0 1738 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 CTPS1P17812 591 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 EVI2BP34910 448 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 MTERF1Q99551 399 aaKnown RBP8.54□□□□□ -1.04
COL6A6-201ENST00000358511 ARL6Q9H0F7 186 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 SMPD4Q9NXE4 827 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 ANKMY1Q9P2S6 941 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 CYTH4Q9UIA0 394 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 ACSL5Q9ULC5 683 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 RIMBP3CA6NJZ7 1639 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 RIMBP3BA6NNM3 1639 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 RIMBP3Q9UFD9 1639 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 RPS2P15880 293 aaKnown RBP8.54□□□□□ -1.04
COL6A6-201ENST00000358511 SPAM1P38567 509 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 RNF180Q86T96 592 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms