RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 HTR3DQ70Z44 454 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 GPR155Q7Z3F1 870 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 PTOV1Q86YD1 416 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 BBS7Q8IWZ6 715 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 CPXM2Q8N436 756 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 RNF175Q8N4F7 328 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 VMP1Q96GC9 406 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 SCLYQ96I15 445 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 PANX1Q96RD7 426 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 EBPLQ9BY08 206 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 ERVK-11Q9UQG0 969 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 SCN5AQ14524 2016 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 MYO1GB0I1T2 1018 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 hCG_2039718K7EN88 272 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 MAN1A2O60476 641 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 JRKO75564 520 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 FABP3P05413 133 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 C1SP09871 688 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 ITPKAP23677 461 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 HOXD12P35452 270 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 VLDLRP98155 873 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 CHIT1Q13231 466 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 SP140Q13342 867 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 PLEKHS1Q5SXH7 462 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 EGFLAMQ63HQ2 1017 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 NIPAL1Q6NVV3 410 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 LINC00299Q6ZSB3 139 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 EIF3MQ7L2H7 374 aaKnown RBP17.12■□□□□ 0.33
GYPC-202ENST00000356887 SYT12Q8IV01 421 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 TCEAL8Q8IYN2 117 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 CPA6Q8N4T0 437 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 TMCO5AQ8N6Q1 288 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 MAGEB10Q96LZ2 347 aaPredicted RBP17.12■□□□□ 0.33
GYPC-202ENST00000356887 AKIP1Q9NQ31 210 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 OGDHLQ9ULD0 1010 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 NDRG4Q9ULP0 352 aaKnown RBP17.12■□□□□ 0.33
GYPC-202ENST00000356887 GMPPBQ9Y5P6 360 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 INSL5Q9Y5Q6 135 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 KIAA1671Q9BY89 1806 aa17.12■□□□□ 0.33
GYPC-202ENST00000356887 SLC22A1O15245 554 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 DIRAS1O95057 198 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 EPN2O95208 641 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 ATP1B2P14415 290 aaPredicted RBP17.11■□□□□ 0.33
GYPC-202ENST00000356887 PORP16435 677 aaPredicted RBP17.11■□□□□ 0.33
GYPC-202ENST00000356887 CYP2A7P20853 494 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 HOXA9P31269 272 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 HALP42357 657 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 PFN3P60673 137 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 IL1RL1Q01638 556 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 SYT6Q5T7P8 510 aaPredicted RBP17.11■□□□□ 0.33
GYPC-202ENST00000356887 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.11■□□□□ 0.337e-12■■■■■ 33.1
GYPC-202ENST00000356887 ZNF621Q6ZSS3 439 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 CBLL1Q75N03 491 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 VTCN1Q7Z7D3 282 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 GALNT10Q86SR1 603 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 TTC29Q8NA56 475 aaPredicted RBP17.11■□□□□ 0.33
GYPC-202ENST00000356887 LMLNQ96KR4 655 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 APOL4Q9BPW4 351 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 NECTIN3Q9NQS3 549 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 SCN3BQ9NY72 215 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 PDP1Q9P0J1 537 aaPredicted RBP17.11■□□□□ 0.33
GYPC-202ENST00000356887 CFAP97Q9P2B7 532 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 OBSL1O75147 1896 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 KRT87PA6NCN2 255 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 PABPN1LA6NDY0 278 aaKnown RBP17.11■□□□□ 0.33
GYPC-202ENST00000356887 SPINT3P49223 89 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 CCR3P51677 355 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 AP1S2P56377 157 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 CSTF3Q12996 717 aaKnown RBP17.11■□□□□ 0.33
GYPC-202ENST00000356887 ADPRMQ3LIE5 342 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 ZDHHC20Q5W0Z9 365 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 SLCO6A1Q86UG4 719 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 RASGRP3Q8IV61 690 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 OR8J2Q8NGG1 315 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 ATG10Q9H0Y0 220 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 HMG20AQ9NP66 347 aa17.11■□□□□ 0.33
GYPC-202ENST00000356887 FAM120CQ9NX05 1096 aaKnown RBP17.11■□□□□ 0.33
GYPC-202ENST00000356887 MAGEB17A8MXT2 336 aa17.1■□□□□ 0.33
GYPC-202ENST00000356887 E9PQ18 207 aa17.1■□□□□ 0.33
GYPC-202ENST00000356887 MASP1P48740 699 aa17.1■□□□□ 0.33
GYPC-202ENST00000356887 C21orf58P58505 322 aa17.1■□□□□ 0.33
GYPC-202ENST00000356887 ZNF33BQ06732 778 aa17.1■□□□□ 0.33
GYPC-202ENST00000356887 MAD2L1BPQ15013 274 aaPredicted RBP17.1■□□□□ 0.33
GYPC-202ENST00000356887 LIPJQ5W064 366 aa17.1■□□□□ 0.33
GYPC-202ENST00000356887 SERPINA13PQ6UXR4 307 aa17.1■□□□□ 0.33
GYPC-202ENST00000356887 BTLAQ7Z6A9 289 aa17.1■□□□□ 0.33
GYPC-202ENST00000356887 TSPYL5Q86VY4 417 aaPredicted RBP17.1■□□□□ 0.33
GYPC-202ENST00000356887 HORMAD1Q86X24 394 aa17.1■□□□□ 0.33
GYPC-202ENST00000356887 HSH2DQ96JZ2 352 aa17.1■□□□□ 0.33
GYPC-202ENST00000356887 CPEB1Q9BZB8 566 aaKnown RBP17.1■□□□□ 0.33
GYPC-202ENST00000356887 MRPL17Q9NRX2 175 aaKnown RBP17.1■□□□□ 0.33
GYPC-202ENST00000356887 UPK3BL1B0FP48 263 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 UPK3BL2E5RIL1 263 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 YY2O15391 372 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 BNIP3LO60238 219 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 MRPS14O60783 128 aaKnown RBP17.09■□□□□ 0.33
GYPC-202ENST00000356887 CPSF4O95639 269 aaKnown RBP17.09■□□□□ 0.33
GYPC-202ENST00000356887 CXCL10P02778 98 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 MT-ND2P03891 347 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 COX7A2P14406 83 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms