RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 UTS2RQ9UKP6 389 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 PLEKHA6Q9Y2H5 1048 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 INSL6Q9Y581 213 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 UPK3BL1B0FP48 263 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 UPK3BL2E5RIL1 263 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 ERI3O43414 337 aaKnown RBP6.3□□□□□ -1.4
UPF2-201ENST00000356352 TBX1O43435 398 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 USP2O75604 605 aaPredicted RBP6.3□□□□□ -1.4
UPF2-201ENST00000356352 PIAS1O75925 651 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 AHSA1O95433 338 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 MYCLP1P12525 358 aaPredicted RBP6.3□□□□□ -1.4
UPF2-201ENST00000356352 ACP5P13686 325 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 MSX2P35548 267 aaPredicted RBP6.3□□□□□ -1.4
UPF2-201ENST00000356352 OR2B6P58173 313 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 MTPNP58546 118 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 ZNF33AQ06730 810 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 PON3Q15166 354 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 CYP1B1Q16678 543 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 ANKRD22Q5VYY1 191 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 HGSNATQ68CP4 663 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 LRRC57Q8N9N7 239 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 KCNN1Q92952 543 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 SIPA1Q96FS4 1042 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 CMKLR1Q99788 373 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 BTBD1Q9H0C5 482 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 LDAHQ9H6V9 325 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 METTL7AQ9H8H3 244 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 BRD7Q9NPI1 651 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.3□□□□□ -1.4
UPF2-201ENST00000356352 NLGN3Q9NZ94 848 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 COMMD3Q9UBI1 195 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 GRHPRQ9UBQ7 328 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 SERTAD3Q9UJW9 196 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 EXOSC1Q9Y3B2 195 aaKnown RBP6.3□□□□□ -1.4
UPF2-201ENST00000356352 PLIN4Q96Q06 1357 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 MROH2AA6NES4 1674 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 SOX30O94993 753 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 SYNGR4O95473 234 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 CHRNA1P02708 482 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 BMP6P22004 513 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 F8A1P23610 371 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 AZGP1P25311 298 aaKnown RBP6.3□□□□□ -1.4
UPF2-201ENST00000356352 HERV-K104P61576 105 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 MERTKQ12866 999 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 WSCD2Q2TBF2 565 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 PRSS55Q6UWB4 352 aaPredicted RBP6.3□□□□□ -1.4
UPF2-201ENST00000356352 SLC36A4Q6YBV0 504 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 PYROXD2Q8N2H3 581 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 SUN5Q8TC36 379 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 EZH1Q92800 747 aaPredicted RBP6.3□□□□□ -1.4
UPF2-201ENST00000356352 TLCD1Q96CP7 247 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 SUSD3Q96L08 255 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 CAPNS2Q96L46 248 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 COL21A1Q96P44 957 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 CCDC86Q9H6F5 360 aaKnown RBP6.3□□□□□ -1.4
UPF2-201ENST00000356352 RETREG1Q9H6L5 497 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 ASB6Q9NWX5 421 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 ZNF69Q9UC07 566 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 YIPF1Q9Y548 306 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 WASF2Q9Y6W5 498 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 CLIC1O00299 241 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 PCDHGA12O60330 932 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 KDM4BO94953 1096 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 HTR1AP08908 422 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 ENGP17813 658 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 HRH2P25021 359 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 ERP29P30040 261 aaKnown RBP6.3□□□□□ -1.4
UPF2-201ENST00000356352 PTGIRP43119 386 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 MAGEA12P43365 314 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 GANABQ14697 944 aaKnown RBP6.3□□□□□ -1.4
UPF2-201ENST00000356352 SPIN3Q5JUX0 258 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 PHF19Q5T6S3 580 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 KIAA1161Q6NSJ0 714 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 GPR153Q6NV75 609 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 ASB18Q6ZVZ8 466 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 ZER1Q7Z7L7 766 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 THOC6Q86W42 341 aaKnown RBP6.3□□□□□ -1.4
UPF2-201ENST00000356352 PRSS58Q8IYP2 241 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 OR8H3Q8N146 312 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 LRRC20Q8TCA0 184 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 FZD8Q9H461 694 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 RMI1Q9H9A7 625 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 CENPMQ9NSP4 180 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 ZNF358Q9NW07 568 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 DTLQ9NZJ0 730 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 REXO2Q9Y3B8 237 aaKnown RBP6.3□□□□□ -1.4
UPF2-201ENST00000356352 MYBPHLA2RUH7 354 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 FAM170BA6NMN3 283 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 NOBOXO60393 691 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 SLC19A2O60779 497 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 CD36P16671 472 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 CD72P21854 359 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 OR12D2P58182 307 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 TAS2R39P59534 338 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 CD47Q08722 323 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 DSG2Q14126 1118 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 DSC3Q14574 896 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 CDK10Q15131 360 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 GPR68Q15743 365 aa6.29□□□□□ -1.4
UPF2-201ENST00000356352 MARCH9Q86YJ5 346 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms