RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 CTXN3Q4LDR2 81 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 SNAP47Q5SQN1 464 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 ADNP2Q6IQ32 1131 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 PLPP6Q8IY26 295 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 MS4A4AQ96JQ5 239 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 PTPN18Q99952 460 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 ARL15Q9NXU5 204 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 MBD1Q9UIS9 605 aaPredicted RBP9.83□□□□□ -0.84
PTPRA-203ENST00000356147 BTBD3Q9Y2F9 522 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 NINQ8N4C6 2090 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 HAT1O14929 419 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 HOXC11O43248 304 aaPredicted RBP9.82□□□□□ -0.84
PTPRA-203ENST00000356147 ZW10O43264 779 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 KIAA0513O60268 411 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 STK16O75716 305 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 ADORA3P0DMS8 318 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 EPORP19235 508 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 CR2P20023 1033 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 ST3GAL4Q11206 333 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 LRRC73Q5JTD7 316 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 SPRYD7Q5W111 196 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 KLHL17Q6TDP4 642 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 NEK10Q6ZWH5 1172 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 LSRQ86X29 649 aaPredicted RBP9.82□□□□□ -0.84
PTPRA-203ENST00000356147 PTOV1Q86YD1 416 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 SLC5A8Q8N695 610 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 GLB1L3Q8NCI6 653 aaPredicted RBP9.82□□□□□ -0.84
PTPRA-203ENST00000356147 OR9Q2Q8NGE9 314 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 GTPBP3Q969Y2 492 aaKnown RBP9.82□□□□□ -0.84
PTPRA-203ENST00000356147 CEP19Q96LK0 163 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 MTERF1Q99551 399 aaKnown RBP9.82□□□□□ -0.84
PTPRA-203ENST00000356147 NIPSNAP1Q9BPW8 284 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 MMP28Q9H239 520 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 FNIP2Q9P278 1114 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 RAPGEFL1Q9UHV5 662 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 GOLGA4Q13439 2230 aaKnown RBP9.82□□□□□ -0.84
PTPRA-203ENST00000356147 GBF1Q92538 1859 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 J3KTA2 159 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 WNT9AO14904 365 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 MED26O95402 600 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 CLDN7O95471 211 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 RPLP0P05388 317 aaKnown RBP9.82□□□□□ -0.84
PTPRA-203ENST00000356147 POU1F1P28069 291 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 PIK3CBP42338 1070 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 MXD1Q05195 221 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 HSPA14Q0VDF9 509 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 TSTQ16762 297 aaKnown RBP9.82□□□□□ -0.84
PTPRA-203ENST00000356147 LRRC26Q2I0M4 334 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 SPANXN2Q5MJ10 180 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 RSPO2Q6UXX9 243 aaPredicted RBP9.82□□□□□ -0.84
PTPRA-203ENST00000356147 SLC46A3Q7Z3Q1 461 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 LACC1Q8IV20 430 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 ZZZ3Q8IYH5 903 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 LILRB4Q8NHJ6 448 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 TP53INP1Q96A56 240 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 SH3KBP1Q96B97 665 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 SPATA17Q96L03 361 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 SDHCQ99643 169 aaPredicted RBP9.82□□□□□ -0.84
PTPRA-203ENST00000356147 TMEM121BQ9BXQ6 578 aaPredicted RBP9.82□□□□□ -0.84
PTPRA-203ENST00000356147 TLR8Q9NR97 1041 aaKnown RBP9.82□□□□□ -0.84
PTPRA-203ENST00000356147 IL17CQ9P0M4 197 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 RHCGQ9UBD6 479 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 ZNF221Q9UK13 617 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 GPSM3Q9Y4H4 160 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 NLRC5Q86WI3 1866 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 PNMA8CA0A1B0GUJ8 204 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 FAM227AF5H4B4 570 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 CLDN9O95484 217 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 KLKB1P03952 638 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 FHP07954 510 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 CXCR2P25025 360 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 KIR3DL1P43629 444 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 RGS4P49798 205 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 CRYBA2P53672 197 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 CLDN8P56748 225 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 CXCR4P61073 352 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 ARF5P84085 180 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 FADDQ13158 208 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 MAD2L1Q13257 205 aaPredicted RBP9.82□□□□□ -0.84
PTPRA-203ENST00000356147 FAM180BQ6P0A1 224 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 PNCKQ6P2M8 343 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 RFLNAQ6ZTI6 216 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 ADGRE3Q9BY15 652 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 TRIM39Q9HCM9 518 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 CCNB1IP1Q9NPC3 277 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 TIGARQ9NQ88 270 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 MUTYHQ9UIF7 546 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 VPS9D1Q9Y2B5 631 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 PCDHB5Q9Y5E4 795 aa9.82□□□□□ -0.84
PTPRA-203ENST00000356147 MKI67P46013 3256 aaKnown RBP9.81□□□□□ -0.84
PTPRA-203ENST00000356147 A0A0U1RQF3 1178 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 ISPDA4D126 451 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 WWP2O00308 870 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 PRAMEF4O60810 478 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 WDR47O94967 919 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 APOA1P02647 267 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 F11P03951 625 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 CSF2P04141 144 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 LAMP1P11279 417 aa9.81□□□□□ -0.84
PTPRA-203ENST00000356147 CKMT1AP12532 417 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms