RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 DPY19L1Q2PZI1 675 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 DEFB115Q30KQ5 88 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 C5orf22Q49AR2 442 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 USP39Q53GS9 565 aaKnown RBP13.37□□□□□ -0.27
EBF3-201ENST00000355311 KLHL17Q6TDP4 642 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 ZDHHC21Q8IVQ6 265 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 SFTPA1Q8IWL2 248 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 REM2Q8IYK8 340 aaPredicted RBP13.37□□□□□ -0.27
EBF3-201ENST00000355311 PXYLP1Q8TE99 480 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 RPL3LQ92901 407 aaKnown RBP13.37□□□□□ -0.27
EBF3-201ENST00000355311 DUS3LQ96G46 650 aaKnown RBP13.37□□□□□ -0.27
EBF3-201ENST00000355311 MBOAT4Q96T53 435 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 YME1L1Q96TA2 773 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 RIOK2Q9BVS4 552 aaKnown RBP13.37□□□□□ -0.27
EBF3-201ENST00000355311 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.37□□□□□ -0.27
EBF3-201ENST00000355311 DOCK9Q9BZ29 2069 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 FADS2O95864 444 aaKnown RBP13.36□□□□□ -0.27
EBF3-201ENST00000355311 VIPP01282 170 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 HTR1AP08908 422 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 COX7A2P14406 83 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 NAT1P18440 290 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 TGM1P22735 817 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 DCTP40126 519 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 HNF4AP41235 474 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 HLCSP50747 726 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 VLDLRP98155 873 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 FAM209AQ5JX71 171 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 CCNYL2Q5T2Q4 361 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 CHST9Q7L1S5 443 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 THAP5Q7Z6K1 395 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 PROSER1Q86XN7 944 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 ANKRD13BQ86YJ7 626 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 ZCCHC7Q8N3Z6 543 aaKnown RBP13.36□□□□□ -0.27
EBF3-201ENST00000355311 RHCGQ9UBD6 479 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 ITGB1BP2Q9UKP3 347 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 GNG14A0A1W2PPG7 69 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 A8MV72 311 aaPredicted RBP13.36□□□□□ -0.27
EBF3-201ENST00000355311 NADKO95544 446 aaPredicted RBP13.36□□□□□ -0.27
EBF3-201ENST00000355311 KRT75O95678 551 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 SOD2P04179 222 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 COPZ1P61923 177 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 SYT16Q17RD7 645 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 INO80DQ53TQ3 878 aaPredicted RBP13.36□□□□□ -0.27
EBF3-201ENST00000355311 GTF2IRD2BQ6EKJ0 949 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 GPR153Q6NV75 609 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 ZNF852Q6ZMS4 543 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 SLC16A12Q6ZSM3 486 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 GTF2IRD2Q86UP8 949 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 C11orf74Q86VG3 221 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 MICU2Q8IYU8 434 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 NLGN4XQ8N0W4 816 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 DCAF4L2Q8NA75 395 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 OTUB1Q96FW1 271 aaPredicted RBP13.36□□□□□ -0.27
EBF3-201ENST00000355311 MRPL9Q9BYD2 267 aaKnown RBP13.36□□□□□ -0.27
EBF3-201ENST00000355311 TRIT1Q9H3H1 467 aaKnown RBP13.36□□□□□ -0.27
EBF3-201ENST00000355311 KAT8Q9H7Z6 458 aaKnown RBP13.36□□□□□ -0.27
EBF3-201ENST00000355311 PALMDQ9NP74 551 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 KLHL3Q9UH77 587 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 LSM7Q9UK45 103 aaKnown RBP13.36□□□□□ -0.27
EBF3-201ENST00000355311 PCM1Q15154 2024 aa13.36□□□□□ -0.27
EBF3-201ENST00000355311 WDFY3Q8IZQ1 3526 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 A0A0G2JN53 185 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 LOC100130705A0A1B0GUX0 176 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 HIDE1A8MVS5 230 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 FPGTO14772 594 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 TSPAN6O43657 245 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 LEFTY1O75610 366 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 SEC14L2O76054 403 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 TGFB1P01137 390 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 LRG1P02750 347 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 C8AP07357 584 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 C1SP09871 688 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 PSMB9P28065 219 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 SLC19A1P41440 591 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 RACK1P63244 317 aaKnown RBP13.35□□□□□ -0.27
EBF3-201ENST00000355311 CDKN3Q16667 212 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 PPP2R2DQ66LE6 453 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 SPATC1Q76KD6 591 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 ATG16L2Q8NAA4 619 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 PDPRQ8NCN5 879 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 ZNF555Q8NEP9 628 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 GLMNQ92990 594 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 ZNF558Q96NG5 402 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 GPBP1L1Q9HC44 474 aaPredicted RBP13.35□□□□□ -0.27
EBF3-201ENST00000355311 SERHLQ9NQF3 203 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 PDP1Q9P0J1 537 aaPredicted RBP13.35□□□□□ -0.27
EBF3-201ENST00000355311 C5AR2Q9P296 337 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 PCDHB1Q9Y5F3 818 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 TRIM64A6NGJ6 449 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 NOTOA8MTQ0 251 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 MAGEB17A8MXT2 336 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 KRT6AP02538 564 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 KRT6BP04259 564 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 FCGR1AP12314 374 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 HOXD10P28358 340 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 KRT6CP48668 564 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 RAB15P59190 212 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 MVKQ03426 396 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 RUNDC3AQ59EK9 446 aa13.35□□□□□ -0.27
EBF3-201ENST00000355311 PLPP4Q5VZY2 271 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms