RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 GPNMBQ14956 572 aa23.77■■□□□ 1.4
CPNE1-202ENST00000352393 CRTC1Q6UUV9 634 aa23.77■■□□□ 1.4
CPNE1-202ENST00000352393 ASB11Q8WXH4 323 aa23.77■■□□□ 1.4
CPNE1-202ENST00000352393 BHMTQ93088 406 aa23.77■■□□□ 1.4
CPNE1-202ENST00000352393 ABCG8Q9H221 673 aa23.77■■□□□ 1.4
CPNE1-202ENST00000352393 ANKHQ9HCJ1 492 aa23.77■■□□□ 1.4
CPNE1-202ENST00000352393 YIPF1Q9Y548 306 aa23.77■■□□□ 1.4
CPNE1-202ENST00000352393 IGLV3-16A0A075B6K0 115 aa23.76■■□□□ 1.39
CPNE1-202ENST00000352393 ZNF821O75541 412 aaPredicted RBP23.76■■□□□ 1.39
CPNE1-202ENST00000352393 CREMQ03060 361 aa23.76■■□□□ 1.39
CPNE1-202ENST00000352393 NPRL3Q12980 569 aa23.76■■□□□ 1.39
CPNE1-202ENST00000352393 Q6ZNB5 142 aa23.76■■□□□ 1.39
CPNE1-202ENST00000352393 SYT12Q8IV01 421 aa23.76■■□□□ 1.39
CPNE1-202ENST00000352393 UBE2FQ969M7 185 aa23.76■■□□□ 1.39
CPNE1-202ENST00000352393 SLC22A12Q96S37 553 aa23.76■■□□□ 1.39
CPNE1-202ENST00000352393 DPH2Q9BQC3 489 aaPredicted RBP23.76■■□□□ 1.39
CPNE1-202ENST00000352393 GABARAPL3Q9BY60 117 aa23.76■■□□□ 1.39
CPNE1-202ENST00000352393 RASSF1Q9NS23 344 aa23.76■■□□□ 1.39
CPNE1-202ENST00000352393 DNAJC11Q9NVH1 559 aa23.76■■□□□ 1.39
CPNE1-202ENST00000352393 FAM120CQ9NX05 1096 aaKnown RBP23.76■■□□□ 1.39
CPNE1-202ENST00000352393 TBKBP1A7MCY6 615 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 COQ9O75208 318 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 C9P02748 559 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 CD36P16671 472 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 RPP38P78345 283 aaKnown RBP23.75■■□□□ 1.39
CPNE1-202ENST00000352393 SEMG2Q02383 582 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 DNASE1L3Q13609 305 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 INAVAQ3KP66 663 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 PLEKHG6Q3KR16 790 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 ATP13A5Q4VNC0 1218 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 CATSPEREQ5SY80 951 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 AHSA2Q719I0 299 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 SAPCD2Q86UD0 394 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 ENTHD1Q8IYW4 607 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 CRIPAKQ8N1N5 446 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 SYNPOQ8N3V7 929 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 RNF175Q8N4F7 328 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 KIAA1958Q8N8K9 716 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 OR8J2Q8NGG1 315 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 VOPP1Q96AW1 172 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 VN1R3Q9BXE9 311 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 DSN1Q9H410 356 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 OBSL1O75147 1896 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 IGSF6O95976 241 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 NTRK1P04629 796 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 SELPP16109 830 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 TGFBR1P36897 503 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 PPP3CCP48454 512 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 CAMK2GQ13555 558 aaPredicted RBP23.75■■□□□ 1.39
CPNE1-202ENST00000352393 VEZF1Q14119 521 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 ZNF621Q6ZSS3 439 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 TMEM150AQ86TG1 271 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 ABHD8Q96I13 439 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 EPS8L2Q9H6S3 715 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 SLC22A14Q9Y267 594 aa23.75■■□□□ 1.39
CPNE1-202ENST00000352393 FKBP9O95302 570 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 PARNO95453 639 aaKnown RBP23.74■■□□□ 1.39
CPNE1-202ENST00000352393 HIST1H2AGP0C0S8 130 aaPredicted RBP23.74■■□□□ 1.39
CPNE1-202ENST00000352393 MPC1LP0DKB6 136 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 JUPP14923 745 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 HIST1H2ADP20671 130 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 SERPINA4P29622 427 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 CD40LGP29965 261 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 C21orf58P58505 322 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 CAP1Q01518 475 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 SP140Q13342 867 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 TAF12Q16514 161 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 LRRC66Q68CR7 880 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 PDE12Q6L8Q7 609 aaKnown RBP23.74■■□□□ 1.39
CPNE1-202ENST00000352393 VRK3Q8IV63 474 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 FAM217AQ8IXS0 508 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 CLECL1Q8IZS7 167 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 SLC43A3Q8NBI5 491 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 DNASE1L2Q92874 299 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 HIST1H2AHQ96KK5 128 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 C7orf34Q96L11 122 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 EPYCQ99645 322 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 HIST1H2AJQ99878 128 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 CLSTN3Q9BQT9 956 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 H2AFJQ9BTM1 129 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 MBD1Q9UIS9 605 aaPredicted RBP23.74■■□□□ 1.39
CPNE1-202ENST00000352393 TRIM43BA6NCK2 446 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 EFCAB9A8MZ26 197 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 CA12O43570 354 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 OR56A5P0C7T3 313 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 ITPKAP23677 461 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 EIF2DP41214 584 aaKnown RBP23.74■■□□□ 1.39
CPNE1-202ENST00000352393 CRYBA2P53672 197 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 ZXDBP98169 803 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 HSPA14Q0VDF9 509 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 CSTF3Q12996 717 aaKnown RBP23.74■■□□□ 1.39
CPNE1-202ENST00000352393 PLD3Q8IV08 490 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 RHOXF1Q8NHV9 184 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 SLC38A4Q969I6 547 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 HRASLS5Q96KN8 279 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 MAGEB10Q96LZ2 347 aaPredicted RBP23.74■■□□□ 1.39
CPNE1-202ENST00000352393 ITPAQ9BY32 194 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 CHST8Q9H2A9 424 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 NMRK2Q9NPI5 230 aa23.74■■□□□ 1.39
CPNE1-202ENST00000352393 KIAA1522Q9P206 1035 aaPredicted RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms