RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 SLC47A1Q96FL8 570 aa20.65■□□□□ 0.9
PTPN18-202ENST00000347849 TBCDQ9BTW9 1192 aa20.65■□□□□ 0.9
PTPN18-202ENST00000347849 ARL15Q9NXU5 204 aa20.65■□□□□ 0.9
PTPN18-202ENST00000347849 SLC27A6Q9Y2P4 619 aa20.65■□□□□ 0.9
PTPN18-202ENST00000347849 RFXAPO00287 272 aa20.64■□□□□ 0.9
PTPN18-202ENST00000347849 ARNTLO00327 626 aa20.64■□□□□ 0.9
PTPN18-202ENST00000347849 SLC1A7O00341 560 aa20.64■□□□□ 0.9
PTPN18-202ENST00000347849 OTCP00480 354 aa20.64■□□□□ 0.9
PTPN18-202ENST00000347849 SRPRAP08240 638 aaKnown RBP20.64■□□□□ 0.9
PTPN18-202ENST00000347849 PCMT1P22061 227 aa20.64■□□□□ 0.9
PTPN18-202ENST00000347849 XPAP23025 273 aaPredicted RBP20.64■□□□□ 0.9
PTPN18-202ENST00000347849 CTSCP53634 463 aa20.64■□□□□ 0.9
PTPN18-202ENST00000347849 GABARAPL2P60520 117 aa20.64■□□□□ 0.9
PTPN18-202ENST00000347849 RPS3AP61247 264 aaKnown RBP20.64■□□□□ 0.9
PTPN18-202ENST00000347849 NR6A1Q15406 480 aa20.64■□□□□ 0.9
PTPN18-202ENST00000347849 DUSP6Q16828 381 aa20.64■□□□□ 0.9
PTPN18-202ENST00000347849 ZDHHC20Q5W0Z9 365 aa20.64■□□□□ 0.9
PTPN18-202ENST00000347849 DPPA4Q7L190 304 aa20.64■□□□□ 0.9
PTPN18-202ENST00000347849 GIN1Q9NXP7 522 aa20.64■□□□□ 0.9
PTPN18-202ENST00000347849 CCL27Q9Y4X3 112 aa20.64■□□□□ 0.9
PTPN18-202ENST00000347849 POLR3HQ9Y535 204 aaPredicted RBP20.64■□□□□ 0.9
PTPN18-202ENST00000347849 ANGPTL3Q9Y5C1 460 aa20.64■□□□□ 0.9
PTPN18-202ENST00000347849 LSM1O15116 133 aaKnown RBP20.64■□□□□ 0.89
PTPN18-202ENST00000347849 XPNPEP2O43895 674 aa20.64■□□□□ 0.89
PTPN18-202ENST00000347849 EPS8Q12929 822 aa20.64■□□□□ 0.89
PTPN18-202ENST00000347849 KCNC3Q14003 757 aa20.64■□□□□ 0.89
PTPN18-202ENST00000347849 AP5B1Q2VPB7 878 aa20.64■□□□□ 0.89
PTPN18-202ENST00000347849 SGO1Q5FBB7 561 aa20.64■□□□□ 0.89
PTPN18-202ENST00000347849 TMEM179BQ7Z7N9 219 aa20.64■□□□□ 0.89
PTPN18-202ENST00000347849 CADM3Q8N126 398 aa20.64■□□□□ 0.89
PTPN18-202ENST00000347849 SMARCD2Q92925 531 aa20.64■□□□□ 0.89
PTPN18-202ENST00000347849 P2RY13Q9BPV8 354 aa20.64■□□□□ 0.89
PTPN18-202ENST00000347849 RBM4BQ9BQ04 359 aaKnown RBP20.64■□□□□ 0.89
PTPN18-202ENST00000347849 RBM4Q9BWF3 364 aaKnown RBP20.64■□□□□ 0.89
PTPN18-202ENST00000347849 GORASP2Q9H8Y8 452 aa20.64■□□□□ 0.89
PTPN18-202ENST00000347849 ACTR8Q9H981 624 aa20.64■□□□□ 0.89
PTPN18-202ENST00000347849 RDH14Q9HBH5 336 aa20.64■□□□□ 0.89
PTPN18-202ENST00000347849 AKIP1Q9NQ31 210 aa20.64■□□□□ 0.89
PTPN18-202ENST00000347849 DPP7Q9UHL4 492 aa20.64■□□□□ 0.89
PTPN18-202ENST00000347849 U3KQV3 271 aa20.64■□□□□ 0.89
PTPN18-202ENST00000347849 ATG2AQ2TAZ0 1938 aa20.64■□□□□ 0.89
PTPN18-202ENST00000347849 ZNF99A8MXY4 864 aaPredicted RBP20.63■□□□□ 0.89
PTPN18-202ENST00000347849 CNOT3O75175 753 aaKnown RBP20.63■□□□□ 0.89
PTPN18-202ENST00000347849 PRKD3O94806 890 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 POU2F2P09086 479 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 ST8SIA6P61647 398 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 EMX1Q04741 257 aaPredicted RBP20.63■□□□□ 0.89
PTPN18-202ENST00000347849 DNASE1L3Q13609 305 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 PAGE2BQ5JRK9 111 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 C9orf64Q5T6V5 341 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 TANGO2Q6ICL3 276 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 PRR23BQ6ZRT6 265 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 PJA1Q8NG27 643 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 OR7A2PQ8NGA2 310 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 ASB11Q8WXH4 323 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 ITCHQ96J02 903 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 FAM83CQ9BQN1 747 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 WDR12Q9GZL7 423 aaKnown RBP20.63■□□□□ 0.89
PTPN18-202ENST00000347849 SACM1LQ9NTJ5 587 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 ZNF232Q9UNY5 417 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 NEUROG3Q9Y4Z2 214 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 JRKO75564 520 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 ELFN1P0C7U0 828 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 CBSLP0DN79 551 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 ITIH1P19827 911 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 ALDH4A1P30038 563 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 CBSP35520 551 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 HMGCS1Q01581 520 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 ACOX1Q15067 660 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 PDE12Q6L8Q7 609 aaKnown RBP20.63■□□□□ 0.89
PTPN18-202ENST00000347849 RASGEF1AQ8N9B8 481 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 CNIH3Q8TBE1 160 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 ELMO1Q92556 727 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 ARRDC3Q96B67 414 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 MTFMTQ96DP5 389 aaKnown RBP20.63■□□□□ 0.89
PTPN18-202ENST00000347849 PBX4Q9BYU1 374 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 IKZF5Q9H5V7 419 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 HEBP1Q9NRV9 189 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 DKK3Q9UBP4 350 aa20.63■□□□□ 0.89
PTPN18-202ENST00000347849 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.63■□□□□ 0.89
PTPN18-202ENST00000347849 TCF20Q9UGU0 1960 aaKnown RBP20.63■□□□□ 0.89
PTPN18-202ENST00000347849 GRXCR2A6NFK2 248 aa20.62■□□□□ 0.89
PTPN18-202ENST00000347849 M0R3G1 203 aa20.62■□□□□ 0.89
PTPN18-202ENST00000347849 NUAK1O60285 661 aa20.62■□□□□ 0.89
PTPN18-202ENST00000347849 STK16O75716 305 aa20.62■□□□□ 0.89
PTPN18-202ENST00000347849 FCARP24071 287 aa20.62■□□□□ 0.89
PTPN18-202ENST00000347849 DCDC1P59894 354 aa20.62■□□□□ 0.89
PTPN18-202ENST00000347849 TOP3AQ13472 1001 aaPredicted RBP20.62■□□□□ 0.89
PTPN18-202ENST00000347849 FNDC3BQ53EP0 1204 aaKnown RBP20.62■□□□□ 0.89
PTPN18-202ENST00000347849 TRAM1L1Q8N609 369 aa20.62■□□□□ 0.89
PTPN18-202ENST00000347849 UBTD2Q8WUN7 234 aa20.62■□□□□ 0.89
PTPN18-202ENST00000347849 FAM162AQ96A26 154 aa20.62■□□□□ 0.89
PTPN18-202ENST00000347849 DEC1Q9P2X7 70 aa20.62■□□□□ 0.89
PTPN18-202ENST00000347849 KLQ9UEF7 1012 aa20.62■□□□□ 0.89
PTPN18-202ENST00000347849 K7ESM1 405 aa20.62■□□□□ 0.89
PTPN18-202ENST00000347849 ANKRD28O15084 1053 aa20.62■□□□□ 0.89
PTPN18-202ENST00000347849 AQP9O43315 295 aa20.62■□□□□ 0.89
PTPN18-202ENST00000347849 E2F6O75461 281 aa20.62■□□□□ 0.89
PTPN18-202ENST00000347849 AADATQ8N5Z0 425 aa20.62■□□□□ 0.89
PTPN18-202ENST00000347849 OR8J3Q8NGG0 315 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms