RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 PPT2Q9UMR5 302 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 GPSM3Q9Y4H4 160 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 ARIH1Q9Y4X5 557 aaPredicted RBP9.38□□□□□ -0.91
HOXA1-201ENST00000343060 OARD1Q9Y530 152 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 PCDHGA2Q9Y5H1 932 aa9.38□□□□□ -0.91
HOXA1-201ENST00000343060 A0A0X1KG70 313 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 C2orf81A6NN90 581 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 ULK1O75385 1050 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 KCNK5O95279 499 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 THP07101 528 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 PRPH2P23942 346 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 MC4RP32245 332 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 CA8P35219 290 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 ACVRL1P37023 503 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 HSPA7P48741 367 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 CRISP3P54108 245 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 TBX4P57082 545 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 UPP1Q16831 310 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 ARMC4Q5T2S8 1044 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 TIGD3Q6B0B8 471 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 TWF2Q6IBS0 349 aaKnown RBP9.37□□□□□ -0.91
HOXA1-201ENST00000343060 FBXL22Q6P050 247 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 XKRXQ6PP77 449 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 DEPDC4Q8N2C3 294 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 FAM109AQ8N4B1 249 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 CLHC1Q8NHS4 586 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 NELL1Q92832 810 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 RMDN1Q96DB5 314 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 KCNC2Q96PR1 638 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 NSUN3Q9H649 340 aaKnown RBP9.37□□□□□ -0.91
HOXA1-201ENST00000343060 RPRD1BQ9NQG5 326 aaKnown RBP9.37□□□□□ -0.91
HOXA1-201ENST00000343060 DIABLOQ9NR28 239 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 MIOSQ9NXC5 875 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 GPRC5BQ9NZH0 403 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 CNOT2Q9NZN8 540 aaKnown RBP9.37□□□□□ -0.91
HOXA1-201ENST00000343060 MUTYHQ9UIF7 546 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 FKBPLQ9UIM3 349 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 ZNF490Q9ULM2 529 aaPredicted RBP9.37□□□□□ -0.91
HOXA1-201ENST00000343060 DLGAP4Q9Y2H0 992 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 PLXNA4Q9HCM2 1894 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 A8MVJ9 347 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 E5RI56 91 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 HAS3O00219 553 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 GFRA2O00451 464 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 FFAR3O14843 346 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 GPR42O15529 346 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 PRLP01236 227 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 LPOP22079 712 aaPredicted RBP9.37□□□□□ -0.91
HOXA1-201ENST00000343060 ERP29P30040 261 aaKnown RBP9.37□□□□□ -0.91
HOXA1-201ENST00000343060 FCHO2Q0JRZ9 810 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 ST3GAL4Q11206 333 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 CSTF3Q12996 717 aaKnown RBP9.37□□□□□ -0.91
HOXA1-201ENST00000343060 TARDBPQ13148 414 aaKnown RBP eCLIP9.37□□□□□ -0.91
HOXA1-201ENST00000343060 VEZF1Q14119 521 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 SSX1Q16384 188 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 BAK1Q16611 211 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 Q6ZPB1 254 aaPredicted RBP9.37□□□□□ -0.91
HOXA1-201ENST00000343060 UTS2BQ765I0 119 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 BPHLQ86WA6 291 aaPredicted RBP9.37□□□□□ -0.91
HOXA1-201ENST00000343060 METTL23Q86XA0 190 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 KRT73Q86Y46 540 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 STK40Q8N2I9 435 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 STX19Q8N4C7 294 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 REPS1Q96D71 796 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 ZBED2Q9BTP6 218 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 SPATA9Q9BWV2 254 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 ACPTQ9BZG2 426 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 CD244Q9BZW8 370 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 MKRN2Q9H000 416 aaKnown RBP9.37□□□□□ -0.91
HOXA1-201ENST00000343060 SLC22A4Q9H015 551 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 RANGRFQ9HD47 186 aaPredicted RBP9.37□□□□□ -0.91
HOXA1-201ENST00000343060 RAD18Q9NS91 495 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 SATB2Q9UPW6 733 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 PADI2Q9Y2J8 665 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 PCDHGB3Q9Y5G1 929 aa9.37□□□□□ -0.91
HOXA1-201ENST00000343060 CFAP20Q9Y6A4 193 aaKnown RBP9.37□□□□□ -0.91
HOXA1-201ENST00000343060 POLR2AP24928 1970 aaKnown RBP9.36□□□□□ -0.91
HOXA1-201ENST00000343060 A0A1W2PQ09 198 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 SLC12A8A0AV02 714 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 RFXANKO14593 260 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 ZNF780AO75290 641 aaPredicted RBP9.36□□□□□ -0.91
HOXA1-201ENST00000343060 TRIM3O75382 744 aaPredicted RBP9.36□□□□□ -0.91
HOXA1-201ENST00000343060 GPX5O75715 221 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 B3GALT4O96024 378 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 ITGB1P05556 798 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 HLA-DMAP28067 261 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 PIK3CGP48736 1102 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 AFF1P51825 1210 aaKnown RBP9.36□□□□□ -0.91
HOXA1-201ENST00000343060 CRYBA2P53672 197 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 PSPHP78330 225 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 KCNJ10P78508 379 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 TNK1Q13470 666 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 RAP1GAP2Q684P5 730 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 LRRC66Q68CR7 880 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 LYPD8Q6UX82 237 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 GDPGP1Q6ZNW5 385 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 PLCZ1Q86YW0 608 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 REM2Q8IYK8 340 aaPredicted RBP9.36□□□□□ -0.91
HOXA1-201ENST00000343060 VWA5B2Q8N398 1253 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 CADM2Q8N3J6 435 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 260.9 ms