RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 A0A1B0GVM2 712 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 GPR37O15354 613 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 SIGLEC6O43699 453 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 GATCO43716 136 aaKnown RBP9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 MMP20O60882 483 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 PAGE1O75459 146 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 SNAPINO95295 136 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 WDPCPO95876 746 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 PGK1P00558 417 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 SFTPCP11686 197 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 SYN1P17600 705 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 FOXA1P55317 472 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 DSC2Q02487 901 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 HES5Q5TA89 166 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 BCL2L15Q5TBC7 163 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 OTUD1Q5VV17 481 aaPredicted RBP9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 SLC39A4Q6P5W5 647 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 MOXD1Q6UVY6 613 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 HHIPL2Q6UWX4 724 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 TMEM130Q8N3G9 435 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 ATP6V1C2Q8NEY4 427 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 PCDH19Q8TAB3 1148 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 BLOC1S5Q8TDH9 187 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 SFT2D1Q8WV19 159 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 ZNF566Q969W8 418 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 ZNF707Q96C28 371 aaPredicted RBP9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 LRRC46Q96FV0 321 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 TRMT2BQ96GJ1 504 aaKnown RBP9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 MS4A3Q96HJ5 214 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 DIRAS2Q96HU8 199 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 PIWIL1Q96J94 861 aaKnown RBP9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 OR5M11Q96RB7 305 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 ADAT1Q9BUB4 502 aaKnown RBP9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 SRRDQ9UH36 339 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 GPR160Q9UJ42 338 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 ADAM30Q9UKF2 790 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 FKBP7Q9Y680 259 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 ARAP2Q8WZ64 1704 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 MYO1GB0I1T2 1018 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 PDCD5O14737 125 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 CHP2O43745 196 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 HPRP00739 348 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 JUNDP17535 347 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 NDUFB7P17568 137 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 RYKP34925 604 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 CRKLP46109 303 aaKnown RBP9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 AGFG1P52594 562 aaKnown RBP9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 CRHR2Q13324 411 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 GTF2H3Q13889 308 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 MAD2L1BPQ15013 274 aaPredicted RBP9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 SUSD4Q5VX71 490 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 ILDR2Q71H61 639 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 LARP4Q71RC2 724 aaKnown RBP eCLIP9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 ISL2Q96A47 359 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 RHOVQ96L33 236 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 LGMNQ99538 433 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 TREX2Q9BQ50 279 aaPredicted RBP9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 JAM3Q9BX67 310 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 FRMD8P1Q9BZ68 369 aaPredicted RBP9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 CCNL1Q9UK58 526 aaPredicted RBP9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 ING4Q9UNL4 249 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 ORC6Q9Y5N6 252 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 SESN1Q9Y6P5 492 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 TEX13CA0A0J9YWL9 993 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 FABP12A6NFH5 140 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 LRRC14BA6NHZ5 514 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 LACTBL1A8MY62 500 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 NBNO60934 754 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 PDE9AO76083 593 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 STARD3NLO95772 234 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 APBA3O96018 575 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 CD19P15391 556 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 HPGDP15428 266 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 PSMB4P28070 264 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 RGS6P49758 472 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 HK3P52790 923 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 DUSP4Q13115 394 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 SMAD4Q13485 552 aaKnown RBP9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 NFIXQ14938 502 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 MED22Q15528 200 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 ALKAL2Q6UX46 152 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 CEP68Q76N32 757 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 RRM2BQ7LG56 351 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 OTOP1Q7RTM1 612 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 CIR1Q86X95 450 aaPredicted RBP9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 STX12Q86Y82 276 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 ENTHD1Q8IYW4 607 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 WDR20Q8TBZ3 569 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 APH1BQ8WW43 257 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 TCEAL3Q969E4 200 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 COQ10AQ96MF6 247 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 P2RY13Q9BPV8 354 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 TCF25Q9BQ70 676 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 PELOQ9BRX2 385 aaKnown RBP9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 CCM2Q9BSQ5 444 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 CD244Q9BZW8 370 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 ACTR8Q9H981 624 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 RC3H2Q9HBD1 1191 aaKnown RBP9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 A3GALT2U3KPV4 340 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 hCG_1984214I3L0E3 225 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms