RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 C19orf43Q9BQ61 176 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 SORBS1Q9BX66 1292 aaKnown RBP12.25□□□□□ -0.45
DFFB-202ENST00000339350 POLG2Q9UHN1 485 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 AGO1Q9UL18 857 aaKnown RBP12.25□□□□□ -0.45
DFFB-202ENST00000339350 ERVK-19Q9WJR5 959 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 A0A0B4J293 547 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 CRCPO75575 148 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 LDLRP01130 860 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 THRBP10828 461 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 TCF3P15923 654 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 CD36P16671 472 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 CSKP41240 450 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 GDI2P50395 445 aaKnown RBP12.25□□□□□ -0.45
DFFB-202ENST00000339350 TBX4P57082 545 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 CLCA4Q14CN2 919 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 SPANXN2Q5MJ10 180 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 PIK3R6Q5UE93 754 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 CST9Q5W186 159 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 XKRXQ6PP77 449 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 CXCL17Q6UXB2 119 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 MCOLN3Q8TDD5 553 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 RNF31Q96EP0 1072 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 RNF145Q96MT1 663 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 SMIM14Q96QK8 99 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 PPIL3Q9H2H8 161 aaKnown RBP12.25□□□□□ -0.45
DFFB-202ENST00000339350 KAT8Q9H7Z6 458 aaKnown RBP12.25□□□□□ -0.45
DFFB-202ENST00000339350 ZDHHC4Q9NPG8 344 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 NMRK2Q9NPI5 230 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 INTS10Q9NVR2 710 aaKnown RBP12.25□□□□□ -0.45
DFFB-202ENST00000339350 OGDHLQ9ULD0 1010 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 AZIN1O14977 448 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 PSMD3O43242 534 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 CACNG3O60359 315 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 CNTN5O94779 1100 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 FADS2O95864 444 aaKnown RBP12.24□□□□□ -0.45
DFFB-202ENST00000339350 EPOP01588 193 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 PCP4P48539 62 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 GSK3BP49841 420 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 ARSFP54793 590 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 TRIM60Q495X7 471 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 ZNF549Q6P9A3 640 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 TMC8Q8IU68 726 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 TCTE3Q8IZS6 198 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 SVIPQ8NHG7 77 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 USP7Q93009 1102 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 GTPBP2Q9BX10 602 aaKnown RBP12.24□□□□□ -0.45
DFFB-202ENST00000339350 OSGEPL1Q9H4B0 414 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 UXTQ9UBK9 157 aaPredicted RBP12.24□□□□□ -0.45
DFFB-202ENST00000339350 IKZF3Q9UKT9 509 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 PLXNB2O15031 1838 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 AQP12BA6NM10 295 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 SUPT3HB4E1H0 165 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 TSPAN3O60637 253 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 S1PR4O95977 384 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 SRCP12931 536 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 PIGAP37287 484 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 GNPDA1P46926 289 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 POU3F4P49335 361 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 CLCN5P51795 746 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 GBX2P52951 348 aaPredicted RBP12.24□□□□□ -0.45
DFFB-202ENST00000339350 UFM1P61960 85 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 HERVK_113P63132 956 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 FLYWCH1Q4VC44 716 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 KIAA1614Q5VZ46 1190 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 ANKRD34AQ69YU3 496 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 RTL10Q7L3V2 364 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 LIX1LQ8IVB5 337 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 AQP12AQ8IXF9 295 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 GPR152Q8TDT2 470 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 ATOH1Q92858 354 aaPredicted RBP12.24□□□□□ -0.45
DFFB-202ENST00000339350 PSMG2Q969U7 264 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 CCDC126Q96EE4 140 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 PGAP3Q96FM1 320 aaPredicted RBP12.24□□□□□ -0.45
DFFB-202ENST00000339350 HMCESQ96FZ2 354 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 RPRD1AQ96P16 312 aaPredicted RBP12.24□□□□□ -0.45
DFFB-202ENST00000339350 FAM129BQ96TA1 746 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 GAS2L1Q99501 681 aaPredicted RBP12.24□□□□□ -0.45
DFFB-202ENST00000339350 APOL4Q9BPW4 351 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 ERVK-6Q9BXR3 956 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 ARHGAP39Q9C0H5 1083 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 SPNS1Q9H2V7 528 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 ALG2Q9H553 416 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 ING3Q9NXR8 418 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 CHURC1-FNTBB4DL54 471 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 E9PAM4 449 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 APOC1P02654 83 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 C1QBP02746 253 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 CSF2P04141 144 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 HMBSP08397 361 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 RPS3P23396 243 aaKnown RBP eCLIP12.24□□□□□ -0.45
DFFB-202ENST00000339350 HOXA1P49639 335 aaPredicted RBP12.24□□□□□ -0.45
DFFB-202ENST00000339350 AGTR2P50052 363 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 ZNF157P51786 506 aaPredicted RBP12.24□□□□□ -0.45
DFFB-202ENST00000339350 LIPEQ05469 1076 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 POMZP3Q6PJE2 187 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 SLC22A9Q8IVM8 553 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 SCN4BQ8IWT1 228 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 ZNF680Q8NEM1 530 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 CNIH3Q8TBE1 160 aa12.24□□□□□ -0.45
DFFB-202ENST00000339350 DNAJA4Q8WW22 397 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms