RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 GFAPP14136 432 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 PTDSS1P48651 473 aaKnown RBP5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 HMGA2P52926 109 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 PAGE3Q5JUK9 113 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 IRGCQ6NXR0 463 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 FAM117BQ6P1L5 589 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 PAOXQ6QHF9 649 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 PAQR7Q86WK9 346 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 LINC01555Q8NAE3 123 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 NCLNQ969V3 563 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 ATXN7L3BQ96GX2 97 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 MRGPRX1Q96LB2 322 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 BMFQ96LC9 184 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 YTHDF1Q9BYJ9 559 aaKnown RBP5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 ANKRD60Q9BZ19 345 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 A4GALTQ9NPC4 353 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 THSD1Q9NS62 852 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 ACSS1Q9NUB1 689 aaPredicted RBP5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 ZSCAN32Q9NX65 697 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 CROTQ9UKG9 612 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 PCDHGA2Q9Y5H1 932 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 E5RI56 91 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 E9PBE3 544 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 PI15O43692 258 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 KLHL41O60662 606 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 CHEK2O96017 543 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 KRT6AP02538 564 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 CATP04040 527 aaKnown RBP5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 KRT6BP04259 564 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 IDSP22304 550 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 PPIBP23284 216 aaKnown RBP5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 SOX18P35713 384 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 KRT6CP48668 564 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 AP2B1P63010 937 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 RBBP4Q09028 425 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 MPEG1Q2M385 716 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 PTCHD3Q3KNS1 767 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 ATP6AP1LQ52LC2 224 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 SAXO2Q658L1 398 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 KIAA1211LQ6NV74 962 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 GK5Q6ZS86 529 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 MFSD9Q8NBP5 474 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 SORCS1Q8WY21 1168 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 ING5Q8WYH8 240 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 DNASE2BQ8WZ79 361 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 ATP6V1E2Q96A05 226 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 APOOQ9BUR5 198 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 SPATA16Q9BXB7 569 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 C1QTNF7Q9BXJ2 289 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 MRPL1Q9BYD6 325 aaKnown RBP5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 NTN4Q9HB63 628 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 LRTM1Q9HBL6 345 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 PNMA8BQ9ULN7 279 aaPredicted RBP5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 CORO2BQ9UQ03 480 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 RNF11Q9Y3C5 154 aa5.17□□□□□ -1.58
PRPF4B-201ENST00000337659 MYO1GB0I1T2 1018 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 HNRNPRO43390 633 aaKnown RBP5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 RECKO95980 971 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 FURINP09958 794 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 CDH1P12830 882 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 GABRG2P18507 467 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 TIA1P31483 386 aaKnown RBP eCLIP5.16□□□□□ -1.586e-22■■■■■ 58.3
PRPF4B-201ENST00000337659 PCGF2P35227 344 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 EPHA4P54764 986 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 POLE2P56282 527 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 PRKG2Q13237 762 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 BLMHQ13867 455 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 MAPK11Q15759 364 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 C18orf21Q32NC0 220 aaPredicted RBP5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 FNDC3BQ53EP0 1204 aaKnown RBP5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 NHSL2Q5HYW2 709 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 CRB2Q5IJ48 1285 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 UGT2A3Q6UWM9 527 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 PQLC1Q8N2U9 271 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 CLDN19Q8N6F1 224 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 C12orf76Q8N812 135 aaPredicted RBP5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 TNIP2Q8NFZ5 429 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 CXorf40AQ8TE69 158 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 RNF138Q8WVD3 245 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 FGF11Q92914 225 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 CATSPER2Q96P56 530 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 POLR2J2Q9GZM3 115 aaKnown RBP5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 POLR2J3Q9H1A7 115 aaKnown RBP5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 PRDM8Q9NQV8 689 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 MBNL1Q9NR56 388 aaKnown RBP5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 TMEM184CQ9NVA4 438 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 TUBA8Q9NY65 449 aaPredicted RBP5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 SLC23A2Q9UGH3 650 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 PADI2Q9Y2J8 665 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 LRCH1Q9Y2L9 728 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 CPAMD8Q8IZJ3 1885 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 SYNDIG1LA6NDD5 238 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 H0YAE9 185 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 MRASO14807 208 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 TPD52L2O43399 206 aaKnown RBP5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 SNX2O60749 519 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 DIAPH2O60879 1101 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 GCM2O75603 506 aaPredicted RBP5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 CCNDBP1O95273 360 aa5.16□□□□□ -1.58
PRPF4B-201ENST00000337659 RASAL1O95294 804 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms