RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 PARP8Q8N3A8 854 aa18.3■□□□□ 0.52
RFTN1-201ENST00000334133 ZCCHC7Q8N3Z6 543 aaKnown RBP18.3■□□□□ 0.52
RFTN1-201ENST00000334133 C12orf76Q8N812 135 aaPredicted RBP18.3■□□□□ 0.52
RFTN1-201ENST00000334133 LEMD2Q8NC56 503 aa18.3■□□□□ 0.52
RFTN1-201ENST00000334133 CHDHQ8NE62 594 aaPredicted RBP18.3■□□□□ 0.52
RFTN1-201ENST00000334133 VN1R2Q8NFZ6 395 aa18.3■□□□□ 0.52
RFTN1-201ENST00000334133 HUS1BQ8NHY5 278 aa18.3■□□□□ 0.52
RFTN1-201ENST00000334133 ADAMTS16Q8TE57 1224 aa18.3■□□□□ 0.52
RFTN1-201ENST00000334133 CLP1Q92989 425 aaKnown RBP18.3■□□□□ 0.52
RFTN1-201ENST00000334133 NXPE3Q969Y0 559 aa18.3■□□□□ 0.52
RFTN1-201ENST00000334133 ZSCAN5AQ9BUG6 496 aa18.3■□□□□ 0.52
RFTN1-201ENST00000334133 OR2AG1Q9H205 316 aa18.3■□□□□ 0.52
RFTN1-201ENST00000334133 RIBC2Q9H4K1 309 aa18.3■□□□□ 0.52
RFTN1-201ENST00000334133 EIF3FO00303 357 aaPredicted RBP18.3■□□□□ 0.52
RFTN1-201ENST00000334133 WNT9AO14904 365 aa18.3■□□□□ 0.52
RFTN1-201ENST00000334133 ATG13O75143 517 aa18.3■□□□□ 0.52
RFTN1-201ENST00000334133 KCNK5O95279 499 aa18.3■□□□□ 0.52
RFTN1-201ENST00000334133 ANXA4P09525 319 aaPredicted RBP18.3■□□□□ 0.52
RFTN1-201ENST00000334133 CRHBPP24387 322 aa18.3■□□□□ 0.52
RFTN1-201ENST00000334133 RPS13P62277 151 aaKnown RBP18.3■□□□□ 0.52
RFTN1-201ENST00000334133 PDE12Q6L8Q7 609 aaKnown RBP18.3■□□□□ 0.52
RFTN1-201ENST00000334133 XKR5Q6UX68 686 aa18.3■□□□□ 0.52
RFTN1-201ENST00000334133 CYP4Z1Q86W10 505 aa18.3■□□□□ 0.52
RFTN1-201ENST00000334133 ARL10Q8N8L6 244 aa18.3■□□□□ 0.52
RFTN1-201ENST00000334133 OR4K1Q8NGD4 311 aa18.3■□□□□ 0.52
RFTN1-201ENST00000334133 RBM4BQ9BQ04 359 aaKnown RBP18.3■□□□□ 0.52
RFTN1-201ENST00000334133 RBM4Q9BWF3 364 aaKnown RBP18.3■□□□□ 0.52
RFTN1-201ENST00000334133 OSBPL6Q9BZF3 934 aa18.3■□□□□ 0.52
RFTN1-201ENST00000334133 ATXN10Q9UBB4 475 aa18.3■□□□□ 0.52
RFTN1-201ENST00000334133 TMEFF2Q9UIK5 374 aaPredicted RBP18.3■□□□□ 0.52
RFTN1-201ENST00000334133 DGKBQ9Y6T7 804 aa18.3■□□□□ 0.52
RFTN1-201ENST00000334133 LOC100130705A0A1B0GUX0 176 aa18.29■□□□□ 0.52
RFTN1-201ENST00000334133 GABRR3A8MPY1 467 aa18.29■□□□□ 0.52
RFTN1-201ENST00000334133 SCN2BO60939 215 aa18.29■□□□□ 0.52
RFTN1-201ENST00000334133 PSIP1O75475 530 aaKnown RBP18.29■□□□□ 0.52
RFTN1-201ENST00000334133 EPN2O95208 641 aa18.29■□□□□ 0.52
RFTN1-201ENST00000334133 VLDLRP98155 873 aa18.29■□□□□ 0.52
RFTN1-201ENST00000334133 DHCR24Q15392 516 aa18.29■□□□□ 0.52
RFTN1-201ENST00000334133 LAIR2Q6ISS4 152 aa18.29■□□□□ 0.52
RFTN1-201ENST00000334133 CRTC3Q6UUV7 619 aa18.29■□□□□ 0.52
RFTN1-201ENST00000334133 TECPR1Q7Z6L1 1165 aa18.29■□□□□ 0.52
RFTN1-201ENST00000334133 DCP2Q8IU60 420 aaKnown RBP18.29■□□□□ 0.52
RFTN1-201ENST00000334133 CHPFQ8IZ52 775 aa18.29■□□□□ 0.52
RFTN1-201ENST00000334133 OR7G3Q8NG95 312 aa18.29■□□□□ 0.52
RFTN1-201ENST00000334133 CSGALNACT1Q8TDX6 532 aa18.29■□□□□ 0.52
RFTN1-201ENST00000334133 LHPPQ9H008 270 aa18.29■□□□□ 0.52
RFTN1-201ENST00000334133 KPNA5O15131 536 aa18.29■□□□□ 0.52
RFTN1-201ENST00000334133 RECQL5O94762 991 aaPredicted RBP18.29■□□□□ 0.52
RFTN1-201ENST00000334133 ZNF182P17025 639 aaPredicted RBP18.29■□□□□ 0.52
RFTN1-201ENST00000334133 EPHA2P29317 976 aa18.29■□□□□ 0.52
RFTN1-201ENST00000334133 GSSP48637 474 aa18.29■□□□□ 0.52
RFTN1-201ENST00000334133 DGKGP49619 791 aa18.29■□□□□ 0.52
RFTN1-201ENST00000334133 TTC23Q5W5X9 447 aa18.29■□□□□ 0.52
RFTN1-201ENST00000334133 ZNF773Q6PK81 442 aa18.29■□□□□ 0.52
RFTN1-201ENST00000334133 FAM43BQ6ZT52 329 aaPredicted RBP18.29■□□□□ 0.52
RFTN1-201ENST00000334133 OR5K1Q8NHB7 308 aa18.29■□□□□ 0.52
RFTN1-201ENST00000334133 SLC16A5O15375 505 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 ZBTB11O95625 1053 aaPredicted RBP18.28■□□□□ 0.52
RFTN1-201ENST00000334133 CATP04040 527 aaKnown RBP18.28■□□□□ 0.52
RFTN1-201ENST00000334133 HTR1AP08908 422 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 SLC6A11P48066 632 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 RAE1P78406 368 aaKnown RBP18.28■□□□□ 0.52
RFTN1-201ENST00000334133 IL5RAQ01344 420 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 BNIP3Q12983 259 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 RAPSNQ13702 412 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 C6orf141Q5SZD1 244 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 SNX19Q92543 992 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 TMEM121BQ9BXQ6 578 aaPredicted RBP18.28■□□□□ 0.52
RFTN1-201ENST00000334133 TMED5Q9Y3A6 229 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 HELZP42694 1942 aaKnown RBP18.28■□□□□ 0.52
RFTN1-201ENST00000334133 PRRT4C9JH25 899 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 H3BM21 787 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 TGFB1P01137 390 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 TNFRSF1BP20333 461 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 MMP12P39900 470 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 MC1RQ01726 317 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 VMACQ2NL98 169 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 LIPJQ5W064 366 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 CPZQ66K79 652 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 XAF1Q6GPH4 301 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 PTOV1Q86YD1 416 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 ZZZ3Q8IYH5 903 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 RSPRY1Q96DX4 576 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 HSPBAP1Q96EW2 488 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 RHNO1Q9BSD3 238 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 CCM2Q9BSQ5 444 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 DUSP26Q9BV47 211 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 ACAT2Q9BWD1 397 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 C11orf49Q9H6J7 331 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 TIMMDC1Q9NPL8 285 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 WARS2Q9UGM6 360 aaKnown RBP18.28■□□□□ 0.52
RFTN1-201ENST00000334133 PLAGL1Q9UM63 463 aa18.28■□□□□ 0.52
RFTN1-201ENST00000334133 OTOL1A6NHN0 477 aaPredicted RBP18.27■□□□□ 0.52
RFTN1-201ENST00000334133 NPC1O15118 1278 aa18.27■□□□□ 0.52
RFTN1-201ENST00000334133 BROXQ5VW32 411 aa18.27■□□□□ 0.52
RFTN1-201ENST00000334133 ZNF480Q8WV37 535 aa18.27■□□□□ 0.52
RFTN1-201ENST00000334133 THAP11Q96EK4 314 aa18.27■□□□□ 0.52
RFTN1-201ENST00000334133 CCDC138Q96M89 665 aa18.27■□□□□ 0.52
RFTN1-201ENST00000334133 TPT1P8Q9HAU6 139 aa18.27■□□□□ 0.52
RFTN1-201ENST00000334133 PAK1IP1Q9NWT1 392 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms