RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 PFKPQ01813 784 aa10.1□□□□□ -0.79
SPTBN1-201ENST00000333896 RAB30Q15771 203 aa10.1□□□□□ -0.79
SPTBN1-201ENST00000333896 UGT8Q16880 541 aa10.1□□□□□ -0.79
SPTBN1-201ENST00000333896 RAET1GQ6H3X3 334 aa10.1□□□□□ -0.79
SPTBN1-201ENST00000333896 RGL4Q8IZJ4 473 aa10.1□□□□□ -0.79
SPTBN1-201ENST00000333896 HSFY1Q96LI6 401 aa10.1□□□□□ -0.79
SPTBN1-201ENST00000333896 VPS25Q9BRG1 176 aa10.1□□□□□ -0.79
SPTBN1-201ENST00000333896 POTEKPQ9BYX7 375 aa10.1□□□□□ -0.79
SPTBN1-201ENST00000333896 BRINP2Q9C0B6 783 aa10.1□□□□□ -0.79
SPTBN1-201ENST00000333896 FAM124BQ9H5Z6 455 aaPredicted RBP10.1□□□□□ -0.79
SPTBN1-201ENST00000333896 THP07101 528 aa10.1□□□□□ -0.79
SPTBN1-201ENST00000333896 KIR3DL1P43629 444 aa10.1□□□□□ -0.79
SPTBN1-201ENST00000333896 HNRNPDQ14103 355 aaKnown RBP10.1□□□□□ -0.79
SPTBN1-201ENST00000333896 BAK1Q16611 211 aa10.1□□□□□ -0.79
SPTBN1-201ENST00000333896 OR10G6Q8NH81 332 aa10.1□□□□□ -0.79
SPTBN1-201ENST00000333896 PIGXQ8TBF5 258 aa10.1□□□□□ -0.79
SPTBN1-201ENST00000333896 CXorf40BQ96DE9 158 aa10.1□□□□□ -0.79
SPTBN1-201ENST00000333896 PLA2G12BQ9BX93 195 aa10.1□□□□□ -0.79
SPTBN1-201ENST00000333896 ASPNQ9BXN1 380 aa10.1□□□□□ -0.79
SPTBN1-201ENST00000333896 TRPM6Q9BX84 2022 aa10.1□□□□□ -0.79
SPTBN1-201ENST00000333896 MAGI3Q5TCQ9 1506 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 A0A0G2JMP0 313 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 TRBC1P01850 177 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 ZBTB48P10074 688 aaPredicted RBP10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 PSMB4P28070 264 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 ICAM3P32942 547 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 SLX4IPQ5VYV7 408 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 OR4M2Q8NGB6 313 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 LRRC58Q96CX6 371 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 OR2M4Q96R27 311 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 DPCDQ9BVM2 203 aaPredicted RBP10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 GPATCH2Q9NW75 528 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 VNN3Q9NY84 501 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 ANKRD34BA5PLL1 514 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 NUDT19A8MXV4 375 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 GCATO75600 419 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 URODP06132 367 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 FMO3P31513 532 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 ZNF143P52747 638 aaPredicted RBP10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 AIF1P55008 147 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 CPSF6Q16630 551 aaKnown RBP eCLIP10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 TMEM119Q4V9L6 283 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 PCSK9Q8NBP7 692 aaKnown RBP10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 NAXEQ8NCW5 288 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 NKX2-3Q8TAU0 364 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 FANK1Q8TC84 345 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 MASTLQ96GX5 879 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 QRSL1Q9H0R6 528 aaKnown RBP10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 RPF2Q9H7B2 306 aaKnown RBP10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 TMEM185BQ9H7F4 350 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 ABCB8Q9NUT2 735 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 EBF1Q9UH73 591 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 CEP290O15078 2479 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 RDH16O75452 317 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 CATP04040 527 aaKnown RBP10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 HLA-FP30511 346 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 LCP2Q13094 533 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 GRM2Q14416 872 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 ZNF311Q5JNZ3 666 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 SLC35F1Q5T1Q4 408 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 C9orf64Q5T6V5 341 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 PPM1MQ96MI6 270 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 RIPOR3Q96MK2 946 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 ERVK-18Q9QC07 812 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 NUBP2Q9Y5Y2 271 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 CXCR6O00574 342 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 ZNF254O75437 659 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 SLC26A9Q7LBE3 791 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 HJURPQ8NCD3 748 aaPredicted RBP10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 SGK2Q9HBY8 427 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 UXTQ9UBK9 157 aaPredicted RBP10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 SIX4Q9UIU6 781 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 NACAE9PAV3 2078 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 DOCK7Q96N67 2140 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 A0A1B0GV50 99 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 HBP1O60381 514 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 SPOCK1Q08629 439 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 UNC5AQ6ZN44 842 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 ILDR1Q86SU0 546 aaPredicted RBP10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 SEMA6DQ8NFY4 1073 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 OR8S1Q8NH09 359 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 CXorf40AQ8TE69 158 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 MGAT4CQ9UBM8 478 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 ENPP5Q9UJA9 477 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 FBXL21Q9UKT6 434 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 ARAP3Q8WWN8 1544 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 GLYATL1P3A0A0U1RQE8 302 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 TRAPPC2P0DI81 140 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 TRAPPC2BP0DI82 140 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 FOXN2P32314 431 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 ZNF543Q08ER8 600 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 XKR4Q5GH76 650 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 PHF13Q86YI8 300 aaPredicted RBP10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 ZNF101Q8IZC7 436 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 SPOCK2Q92563 424 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 PPP1R16AQ96I34 528 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 BARD1Q99728 777 aaKnown RBP10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 VRK1Q99986 396 aaPredicted RBP10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 POLR1EQ9GZS1 481 aaKnown RBP10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 NANSQ9NR45 359 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms