RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 ZNF234Q14588 700 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 C7orf61Q8IZ16 206 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 OFCC1Q8IZS5 231 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 FBXO15Q8NCQ5 510 aaPredicted RBP16.82■□□□□ 0.28
DDX28-201ENST00000332395 ZNF480Q8WV37 535 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 SMARCD2Q92925 531 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 C11orf24Q96F05 449 aaPredicted RBP16.82■□□□□ 0.28
DDX28-201ENST00000332395 PPP1R16AQ96I34 528 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 FAM129BQ96TA1 746 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 SOX17Q9H6I2 414 aaPredicted RBP16.82■□□□□ 0.28
DDX28-201ENST00000332395 THG1LQ9NWX6 298 aaKnown RBP16.82■□□□□ 0.28
DDX28-201ENST00000332395 DNAJB9Q9UBS3 223 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 UTS2RQ9UKP6 389 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 KCNE2Q9Y6J6 123 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 LZTS3O60299 673 aaPredicted RBP16.82■□□□□ 0.28
DDX28-201ENST00000332395 ETHE1O95571 254 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 CA3P07451 260 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 MYCLP1P12525 358 aaPredicted RBP16.82■□□□□ 0.28
DDX28-201ENST00000332395 COX7A2P14406 83 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 EMP3P54852 163 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 CDH15P55291 814 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 SLC14A1Q13336 389 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 GPM6BQ13491 265 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 DAG1Q14118 895 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 SF1Q15637 639 aaKnown RBP16.82■□□□□ 0.28
DDX28-201ENST00000332395 DUOXA1Q1HG43 343 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 DOK6Q6PKX4 331 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 PATL1Q86TB9 770 aaKnown RBP16.82■□□□□ 0.28
DDX28-201ENST00000332395 OR7G3Q8NG95 312 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 CDC26Q8NHZ8 85 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 NETO1Q8TDF5 533 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 GAB3Q8WWW8 586 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 NEIL2Q969S2 332 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 METTL2AQ96IZ6 378 aaKnown RBP16.82■□□□□ 0.28
DDX28-201ENST00000332395 PANX1Q96RD7 426 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 MTIF3Q9H2K0 278 aaKnown RBP16.82■□□□□ 0.28
DDX28-201ENST00000332395 TMEM245Q9H330 911 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 RHBDL2Q9NX52 303 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 MAGED1Q9Y5V3 778 aaPredicted RBP16.82■□□□□ 0.28
DDX28-201ENST00000332395 C5orf42Q9H799 3197 aa16.82■□□□□ 0.28
DDX28-201ENST00000332395 hCG_2014768A0A024R1R8 64 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 GRXCR1A8MXD5 290 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 SERPINA1P01009 418 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 CST1P01037 141 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 ALPLP05186 524 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 TRPC1P48995 793 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 WNT3P56703 355 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 TBPL1P62380 186 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 ADARB1P78563 741 aaKnown RBP16.81■□□□□ 0.28
DDX28-201ENST00000332395 DPTQ07507 201 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 USP51Q70EK9 711 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 ZNF551Q7Z340 670 aaPredicted RBP16.81■□□□□ 0.28
DDX28-201ENST00000332395 TMPRSS11BQ86T26 416 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 STK32CQ86UX6 486 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 ZDHHC13Q8IUH4 622 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 SYTL1Q8IYJ3 562 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 OR8J2Q8NGG1 315 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 FGF13Q92913 245 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 H0YAE9 185 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 FPGTO14772 594 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 SCN2BO60939 215 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 MYO1DO94832 1006 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 ALBP02768 609 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 EN2P19622 333 aaPredicted RBP16.81■□□□□ 0.28
DDX28-201ENST00000332395 PCSK6P29122 969 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 SLC5A2P31639 672 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 ALDH3B2P48448 385 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 C21orf58P58505 322 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 E2F2Q14209 437 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 CAPN13Q6MZZ7 669 aaPredicted RBP16.81■□□□□ 0.28
DDX28-201ENST00000332395 ABRAXAS1Q6UWZ7 409 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 XKR5Q6UX68 686 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 SLCO4C1Q6ZQN7 724 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 CLEC4FQ8N1N0 589 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 HUS1BQ8NHY5 278 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 MAGIXQ9H6Y5 334 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 TRIM39Q9HCM9 518 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 DYRK4Q9NR20 520 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 FAM120CQ9NX05 1096 aaKnown RBP16.81■□□□□ 0.28
DDX28-201ENST00000332395 THEGQ9P2T0 379 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 C2orf16Q68DN1 1984 aa16.81■□□□□ 0.28
DDX28-201ENST00000332395 KIAA1549LQ6ZVL6 1849 aa16.8■□□□□ 0.28
DDX28-201ENST00000332395 EVPLLA8MZ36 301 aa16.8■□□□□ 0.28
DDX28-201ENST00000332395 G3V2T6 193 aa16.8■□□□□ 0.28
DDX28-201ENST00000332395 SH3BGRLO75368 114 aa16.8■□□□□ 0.28
DDX28-201ENST00000332395 IST1P53990 364 aa16.8■□□□□ 0.28
DDX28-201ENST00000332395 RAE1P78406 368 aaKnown RBP16.8■□□□□ 0.28
DDX28-201ENST00000332395 DCTN2Q13561 401 aaKnown RBP16.8■□□□□ 0.28
DDX28-201ENST00000332395 GTF2H3Q13889 308 aa16.8■□□□□ 0.28
DDX28-201ENST00000332395 ZNF547Q8IVP9 402 aa16.8■□□□□ 0.28
DDX28-201ENST00000332395 C1orf52Q8N6N3 182 aaKnown RBP16.8■□□□□ 0.28
DDX28-201ENST00000332395 TERB1Q8NA31 727 aa16.8■□□□□ 0.28
DDX28-201ENST00000332395 PPP1R14BQ96C90 147 aa16.8■□□□□ 0.28
DDX28-201ENST00000332395 SDCCAG3Q96C92 435 aa16.8■□□□□ 0.28
DDX28-201ENST00000332395 PRM3Q9NNZ6 103 aa16.8■□□□□ 0.28
DDX28-201ENST00000332395 TUBA8Q9NY65 449 aaPredicted RBP16.8■□□□□ 0.28
DDX28-201ENST00000332395 CEPT1Q9Y6K0 416 aa16.8■□□□□ 0.28
DDX28-201ENST00000332395 TRIM64A6NGJ6 449 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 CLIC1O00299 241 aa16.79■□□□□ 0.28
DDX28-201ENST00000332395 BMP10O95393 424 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms