RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 VIPP01282 170 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 MAGEA11P43364 429 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 RFX2P48378 723 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 RPL38P63173 70 aaKnown RBP17.63■□□□□ 0.41
PKP3-201ENST00000331563 CLVS2Q5SYC1 327 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 KDM4DQ6B0I6 523 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 GPR153Q6NV75 609 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 UBE2J2Q8N2K1 259 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 GLB1L3Q8NCI6 653 aaPredicted RBP17.63■□□□□ 0.41
PKP3-201ENST00000331563 GALNT11Q8NCW6 608 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 RAET1EQ8TD07 263 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 HERVK_113Q902F9 699 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 DYRK4Q9NR20 520 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 ATP6V1HQ9UI12 483 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 ERP29P30040 261 aaKnown RBP17.62■□□□□ 0.41
PKP3-201ENST00000331563 ETV1P50549 477 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 SNRPD2P62316 118 aaKnown RBP17.62■□□□□ 0.41
PKP3-201ENST00000331563 TIAL1Q01085 375 aaKnown RBP eCLIP17.62■□□□□ 0.41
PKP3-201ENST00000331563 DEFB115Q30KQ5 88 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 MILR1Q7Z6M3 343 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 CCDC71Q8IV32 467 aaPredicted RBP17.62■□□□□ 0.41
PKP3-201ENST00000331563 STX19Q8N4C7 294 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 TTLQ8NG68 377 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 OR10T2Q8NGX3 314 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 KCTD13Q8WZ19 329 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 HEBP1Q9NRV9 189 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 IL20Q9NYY1 176 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 TSR3Q9UJK0 312 aaKnown RBP17.62■□□□□ 0.41
PKP3-201ENST00000331563 TET1Q8NFU7 2136 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 EFCAB10A6NFE3 127 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 IFRD1O00458 451 aaPredicted RBP17.62■□□□□ 0.41
PKP3-201ENST00000331563 PRIM2P49643 509 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 ZMAT1Q5H9K5 638 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 SETD6Q8TBK2 473 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 DEDD2Q8WXF8 326 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 MYLPFQ96A32 169 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 EXOSC4Q9NPD3 245 aaKnown RBP17.62■□□□□ 0.41
PKP3-201ENST00000331563 SLC25A37Q9NYZ2 338 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 NEUROG3Q9Y4Z2 214 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 PCDHGB2Q9Y5G2 931 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 TSPAN4O14817 238 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 PER2O15055 1255 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 SEC22BO75396 215 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 UGT2B17O75795 530 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 CYP2A6P11509 494 aaPredicted RBP17.62■□□□□ 0.41
PKP3-201ENST00000331563 PIK3CBP42338 1070 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 PGFP49763 221 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 FAPQ12884 760 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 NOGQ13253 232 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 IRF3Q14653 427 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 SPANXN4Q5MJ08 99 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 TIGD7Q6NT04 549 aaPredicted RBP17.62■□□□□ 0.41
PKP3-201ENST00000331563 CD300LGQ6UXG3 332 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 ENTHD1Q8IYW4 607 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 PAF1Q8N7H5 531 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 FLCNQ8NFG4 579 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 OR4M1Q8NGD0 313 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 DPY30Q9C005 99 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 HCSTQ9UBK5 93 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 MUTYHQ9UIF7 546 aa17.62■□□□□ 0.41
PKP3-201ENST00000331563 PRG3Q9Y2Y8 225 aaPredicted RBP17.62■□□□□ 0.41
PKP3-201ENST00000331563 PDE4DIPQ5VU43 2346 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 NDUFA2O43678 99 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 CSF2P04141 144 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 CNPP09543 421 aaKnown RBP17.61■□□□□ 0.41
PKP3-201ENST00000331563 PIRTP0C851 137 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 CKBP12277 381 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 NPRL3Q12980 569 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 TBCEQ15813 527 aaPredicted RBP17.61■□□□□ 0.41
PKP3-201ENST00000331563 SDHAF4Q5VUM1 108 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 PM20D1Q6GTS8 502 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 Q6ZPB1 254 aaPredicted RBP17.61■□□□□ 0.41
PKP3-201ENST00000331563 TAC4Q86UU9 113 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 PLCZ1Q86YW0 608 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 CHPFQ8IZ52 775 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 FUBP1Q96AE4 644 aaKnown RBP17.61■□□□□ 0.41
PKP3-201ENST00000331563 B3GALT6Q96L58 329 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.61■□□□□ 0.414e-8■■■■□ 24.8
PKP3-201ENST00000331563 C1orf109Q9NX04 203 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 SRRDQ9UH36 339 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 TMPRSS11EQ9UL52 423 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 ASB1Q9Y576 335 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 PRSS56P0CW18 603 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 HOXA9P31269 272 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 RGS6P49758 472 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 ERVPABLB-1P60509 514 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 GNA13Q14344 377 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 SEMA3AQ14563 771 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 CACHD1Q5VU97 1274 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 KDELC1Q6UW63 502 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 SNX20Q7Z614 316 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 RNF180Q86T96 592 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 APH1BQ8WW43 257 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 KLHL5Q96PQ7 755 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 OR52E6Q96RD3 313 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 SLC25A51Q9H1U9 297 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 TAS2R13Q9NYV9 303 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 ZMYM5Q9UJ78 669 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 ARL5AQ9Y689 179 aa17.61■□□□□ 0.41
PKP3-201ENST00000331563 E5RI56 91 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms