RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 IFT80Q9P2H3 777 aaPredicted RBP14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 EVPLLA8MZ36 301 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 ZNF197O14709 1029 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 E2F6O75461 281 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 RECQL5O94762 991 aaPredicted RBP14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 ADH1CP00326 375 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 HPRP00739 348 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 HNF4AP41235 474 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 ESRRGP62508 458 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 RAE1P78406 368 aaKnown RBP14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 SRSF11Q05519 484 aaKnown RBP14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 PMS2P3Q13401 168 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 RAET1GQ6H3X3 334 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 MSANTD1Q6ZTZ1 278 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 TMPRSS11BQ86T26 416 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 SYTL1Q8IYJ3 562 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 NRSN1Q8IZ57 195 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 ZCCHC7Q8N3Z6 543 aaKnown RBP14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 HCAR2Q8TDS4 363 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 ADAMTS16Q8TE57 1224 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 ZNF480Q8WV37 535 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 SH3KBP1Q96B97 665 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 ARMC5Q96C12 935 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 C11orf24Q96F05 449 aaPredicted RBP14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 MBOAT4Q96T53 435 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 AMBRA1Q9C0C7 1298 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 ING2Q9H160 280 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 ZDHHC4Q9NPG8 344 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 AASDHPPTQ9NRN7 309 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 EBF1Q9UH73 591 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 CDC14AQ9UNH5 594 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 SH2B3Q9UQQ2 575 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 RUVBL1Q9Y265 456 aaKnown RBP14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 HEMK1Q9Y5R4 338 aaPredicted RBP14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 HOXC11O43248 304 aaPredicted RBP14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 C1orf105O95561 183 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 PRNPP04156 253 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 DCTP40126 519 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 TRPC1P48995 793 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 C16orf72Q14CZ0 275 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 DPY19L1Q2PZI1 675 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 HKDC1Q2TB90 917 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 ZBED5Q49AG3 693 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 ZNF658BQ4V348 819 aaPredicted RBP14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 CATSPEREQ5SY80 951 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 TMC5Q6UXY8 1006 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 NLRP8Q86W28 1048 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 ADHFE1Q8IWW8 467 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 WFIKKN2Q8TEU8 576 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 MAGIXQ9H6Y5 334 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 POLR1BQ9H9Y6 1135 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 VNN3Q9NY84 501 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 SLC27A6Q9Y2P4 619 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 REV3LO60673 3130 aa14.36□□□□□ -0.11
CLCNKA-201ENST00000331433 ANTXRLA6NF34 631 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 HS6ST1O60243 411 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 MMP20O60882 483 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 LILRB5O75023 590 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 EPN2O95208 641 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 ANXA4P09525 319 aaPredicted RBP14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 TBPL1P62380 186 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 C9orf64Q5T6V5 341 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 FBXO46Q6PJ61 603 aaPredicted RBP14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 KCTD8Q6ZWB6 473 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 SERPINA11Q86U17 422 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 ETFBKMTQ8IXQ9 262 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 EID3Q8N140 333 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 SVOPLQ8N434 492 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 DNAJC5GQ8N7S2 189 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 OR8J2Q8NGG1 315 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 NUS1Q96E22 293 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 FAM118AQ9NWS6 357 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 PSMD11O00231 422 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 PRMT3O60678 531 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 CCNDBP1O95273 360 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 KCNK5O95279 499 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 C6P13671 934 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 IL7RP16871 459 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 EEF1B2P24534 225 aaKnown RBP14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 GPR1P46091 355 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 VASPP50552 380 aaPredicted RBP14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 RPS13P62277 151 aaKnown RBP14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 STARD3Q14849 445 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 LAPTM4AQ15012 233 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 NEDD8Q15843 81 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 SLCO4C1Q6ZQN7 724 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 CHPFQ8IZ52 775 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 SMG7Q92540 1137 aaKnown RBP14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 ISOC1Q96CN7 298 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 RBM4BQ9BQ04 359 aaKnown RBP14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 RBM4Q9BWF3 364 aaKnown RBP14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 FAM120CQ9NX05 1096 aaKnown RBP14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 PRKAG2Q9UGJ0 569 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 KCNE2Q9Y6J6 123 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 TRANK1O15050 2925 aa14.35□□□□□ -0.11
CLCNKA-201ENST00000331433 XIRP2A4UGR9 3374 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 GABRR3A8MPY1 467 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 SCAMP2O15127 329 aaKnown RBP14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 MYO1DO94832 1006 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 ITGB7P26010 798 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms