RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 PABPN1LA6NDY0 278 aaKnown RBP16.91■□□□□ 0.3
TPM1-203ENST00000317516 SLC16A5O15375 505 aa16.91■□□□□ 0.3
TPM1-203ENST00000317516 MED26O95402 600 aa16.91■□□□□ 0.3
TPM1-203ENST00000317516 CXCR2P25025 360 aa16.91■□□□□ 0.3
TPM1-203ENST00000317516 IMPA1P29218 277 aa16.91■□□□□ 0.3
TPM1-203ENST00000317516 DSG2Q14126 1118 aa16.91■□□□□ 0.3
TPM1-203ENST00000317516 MORF4L2Q15014 288 aa16.91■□□□□ 0.3
TPM1-203ENST00000317516 TMEM151BQ8IW70 566 aa16.91■□□□□ 0.3
TPM1-203ENST00000317516 OR11G2Q8NGC1 345 aa16.91■□□□□ 0.3
TPM1-203ENST00000317516 EEF1AKMT1Q8WVE0 214 aa16.91■□□□□ 0.3
TPM1-203ENST00000317516 MMABQ96EY8 250 aaPredicted RBP16.91■□□□□ 0.3
TPM1-203ENST00000317516 NDNQ99608 321 aa16.91■□□□□ 0.3
TPM1-203ENST00000317516 LHPPQ9H008 270 aa16.91■□□□□ 0.3
TPM1-203ENST00000317516 KCNF1Q9H3M0 494 aa16.91■□□□□ 0.3
TPM1-203ENST00000317516 PARVBQ9HBI1 364 aa16.91■□□□□ 0.3
TPM1-203ENST00000317516 C14orf105Q9NVL8 296 aa16.91■□□□□ 0.3
TPM1-203ENST00000317516 STOX2Q9P2F5 926 aaPredicted RBP16.91■□□□□ 0.3
TPM1-203ENST00000317516 TRPC4Q9UBN4 977 aa16.91■□□□□ 0.3
TPM1-203ENST00000317516 H7BY64 318 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 MASP2O00187 686 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 MAP2K7O14733 419 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 PCDH17O14917 1159 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 HPP00738 406 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 AHSGP02765 367 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 ACPPP15309 386 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 CCND1P24385 295 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 PAFAH1B1P43034 410 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 EMP2P54851 167 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 GNG11P61952 73 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 DR1Q01658 176 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 SP140Q13342 867 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 FAM53BQ14153 422 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 HKDC1Q2TB90 917 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 VWA2Q5GFL6 755 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 GALNT7Q86SF2 657 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 CNTN4Q8IWV2 1026 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 KLHL7Q8IXQ5 586 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 PARP9Q8IXQ6 854 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 LRRC56Q8IYG6 542 aaPredicted RBP16.9■□□□□ 0.3
TPM1-203ENST00000317516 PRSS58Q8IYP2 241 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 DTWD1Q8N5C7 304 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 LRRC39Q96DD0 335 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 THAP11Q96EK4 314 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 CERS2Q96G23 380 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 CAPZA3Q96KX2 299 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 PRAP1Q96NZ9 151 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 TRIM54Q9BYV2 358 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 DRC3Q9H069 523 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 MKKSQ9NPJ1 570 aaPredicted RBP16.9■□□□□ 0.3
TPM1-203ENST00000317516 SAR1BQ9Y6B6 198 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 FLNCQ14315 2725 aa16.9■□□□□ 0.3
TPM1-203ENST00000317516 AGFG2O95081 481 aa16.89■□□□□ 0.29
TPM1-203ENST00000317516 IVDP26440 423 aa16.89■□□□□ 0.29
TPM1-203ENST00000317516 SLC26A3P40879 764 aa16.89■□□□□ 0.29
TPM1-203ENST00000317516 AVPR1BP47901 424 aa16.89■□□□□ 0.29
TPM1-203ENST00000317516 UQCRFS1P47985 274 aa16.89■□□□□ 0.29
TPM1-203ENST00000317516 IL2P60568 153 aa16.89■□□□□ 0.29
TPM1-203ENST00000317516 RPS15AP62244 130 aaKnown RBP16.89■□□□□ 0.29
TPM1-203ENST00000317516 PDAP1Q13442 181 aaKnown RBP16.89■□□□□ 0.29
TPM1-203ENST00000317516 MSS51Q4VC12 460 aa16.89■□□□□ 0.29
TPM1-203ENST00000317516 ATG9BQ674R7 924 aa16.89■□□□□ 0.29
TPM1-203ENST00000317516 PAQR3Q6TCH7 311 aa16.89■□□□□ 0.29
TPM1-203ENST00000317516 Q6ZS92 163 aa16.89■□□□□ 0.29
TPM1-203ENST00000317516 CISD2Q8N5K1 135 aaKnown RBP16.89■□□□□ 0.29
TPM1-203ENST00000317516 SNRNP40Q96DI7 357 aaKnown RBP16.89■□□□□ 0.29
TPM1-203ENST00000317516 THOC3Q96J01 351 aaKnown RBP16.89■□□□□ 0.29
TPM1-203ENST00000317516 WDR77Q9BQA1 342 aaPredicted RBP16.89■□□□□ 0.29
TPM1-203ENST00000317516 FAM129AQ9BZQ8 928 aa16.89■□□□□ 0.29
TPM1-203ENST00000317516 EPS8L2Q9H6S3 715 aa16.89■□□□□ 0.29
TPM1-203ENST00000317516 LRRC4CQ9HCJ2 640 aa16.89■□□□□ 0.29
TPM1-203ENST00000317516 CORO1CQ9ULV4 474 aaPredicted RBP16.89■□□□□ 0.29
TPM1-203ENST00000317516 PDE10AQ9Y233 779 aa16.89■□□□□ 0.29
TPM1-203ENST00000317516 LRRK2Q5S007 2527 aa16.88■□□□□ 0.29
TPM1-203ENST00000317516 KCNE1BA0A087WTH5 132 aa16.88■□□□□ 0.29
TPM1-203ENST00000317516 TCP11X1B4DZS4 312 aa16.88■□□□□ 0.29
TPM1-203ENST00000317516 CCDC188H7C350 402 aa16.88■□□□□ 0.29
TPM1-203ENST00000317516 HAT1O14929 419 aa16.88■□□□□ 0.29
TPM1-203ENST00000317516 BANF1O75531 89 aa16.88■□□□□ 0.29
TPM1-203ENST00000317516 HEXBP07686 556 aa16.88■□□□□ 0.29
TPM1-203ENST00000317516 GABRB3P28472 473 aa16.88■□□□□ 0.29
TPM1-203ENST00000317516 GRK3P35626 688 aa16.88■□□□□ 0.29
TPM1-203ENST00000317516 ELK3P41970 407 aa16.88■□□□□ 0.29
TPM1-203ENST00000317516 GLRBP48167 497 aa16.88■□□□□ 0.29
TPM1-203ENST00000317516 ARL4CP56559 192 aa16.88■□□□□ 0.29
TPM1-203ENST00000317516 TBPL1P62380 186 aa16.88■□□□□ 0.29
TPM1-203ENST00000317516 SRSF1Q07955 248 aaKnown RBP eCLIP16.88■□□□□ 0.292e-10■■■□□ 14.7
TPM1-203ENST00000317516 PRR30Q53SZ7 412 aaPredicted RBP16.88■□□□□ 0.29
TPM1-203ENST00000317516 TEDDM1Q5T9Z0 273 aa16.88■□□□□ 0.29
TPM1-203ENST00000317516 AGTRAPQ6RW13 159 aa16.88■□□□□ 0.29
TPM1-203ENST00000317516 NDUFAF7Q7L592 441 aa16.88■□□□□ 0.29
TPM1-203ENST00000317516 C17orf64Q86WR6 236 aa16.88■□□□□ 0.29
TPM1-203ENST00000317516 CREG2Q8IUH2 290 aa16.88■□□□□ 0.29
TPM1-203ENST00000317516 PPP4R1Q8TF05 950 aa16.88■□□□□ 0.29
TPM1-203ENST00000317516 LINGO1Q96FE5 620 aa16.88■□□□□ 0.29
TPM1-203ENST00000317516 LMF1Q96S06 567 aa16.88■□□□□ 0.29
TPM1-203ENST00000317516 NAPGQ99747 312 aaPredicted RBP16.88■□□□□ 0.29
TPM1-203ENST00000317516 TGIF2Q9GZN2 237 aa16.88■□□□□ 0.29
TPM1-203ENST00000317516 CUEDC1Q9NWM3 386 aaPredicted RBP16.88■□□□□ 0.29
TPM1-203ENST00000317516 RNF14Q9UBS8 474 aa16.88■□□□□ 0.29
TPM1-203ENST00000317516 VWA7Q9Y334 891 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms