RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 CTHP32929 405 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 KIR3DL1P43629 444 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 RPS21P63220 83 aaKnown RBP17.71■□□□□ 0.43
CCDC43-201ENST00000315286 MEF2AQ02078 507 aaPredicted RBP17.71■□□□□ 0.43
CCDC43-201ENST00000315286 MTAPQ13126 283 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 C6orf52Q5T4I8 152 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 THEMIS2Q5TEJ8 643 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 NXPE4Q6UWF7 544 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 DCUN1D3Q8IWE4 304 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 IL17RCQ8NAC3 791 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 PAPD5Q8NDF8 572 aaKnown RBP17.71■□□□□ 0.43
CCDC43-201ENST00000315286 ZNF548Q8NEK5 533 aaPredicted RBP17.71■□□□□ 0.43
CCDC43-201ENST00000315286 CHTF18Q8WVB6 975 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 SEPHS2Q99611 448 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 TBCDQ9BTW9 1192 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 EFCAB11Q9BUY7 163 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 REXO4Q9GZR2 422 aaKnown RBP17.71■□□□□ 0.43
CCDC43-201ENST00000315286 SPNS1Q9H2V7 528 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 INVSQ9Y283 1065 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 A0A1W2PQU0 124 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 PIPSLA2A3N6 862 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 ANHXE9PGG2 379 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 PI15O43692 258 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 PRMT3O60678 531 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 MYO1DO94832 1006 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 COL9A1P20849 921 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 RPL10P27635 214 aaKnown RBP17.71■□□□□ 0.43
CCDC43-201ENST00000315286 SGCGQ13326 291 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 SDE2Q6IQ49 451 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 GCNT7Q6ZNI0 430 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 LAS2Q8IYD9 372 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 MARVELD2Q8N4S9 558 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 GPR156Q8NFN8 814 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 CDC26Q8NHZ8 85 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 SETD7Q8WTS6 366 aaKnown RBP17.71■□□□□ 0.43
CCDC43-201ENST00000315286 REPS1Q96D71 796 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 MSLNLQ96KJ4 702 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 CPPED1Q9BRF8 314 aaPredicted RBP17.71■□□□□ 0.43
CCDC43-201ENST00000315286 EHD1Q9H4M9 534 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 KAT8Q9H7Z6 458 aaKnown RBP17.71■□□□□ 0.43
CCDC43-201ENST00000315286 A0A1W2PQF6 199 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 PLRG1O43660 514 aaKnown RBP17.7■□□□□ 0.42
CCDC43-201ENST00000315286 DNTTP04053 509 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 ANXA6P08133 673 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 TEAD1P28347 426 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 HSPA13P48723 471 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 WNT3P56703 355 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 SRSF11Q05519 484 aaKnown RBP17.7■□□□□ 0.42
CCDC43-201ENST00000315286 PAGE2BQ5JRK9 111 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 UGT2A3Q6UWM9 527 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 ZBTB49Q6ZSB9 765 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 CHST15Q7LFX5 561 aaPredicted RBP17.7■□□□□ 0.42
CCDC43-201ENST00000315286 C10orf111Q8N326 155 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 TMEM132CQ8N3T6 1108 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 OR5K2Q8NHB8 316 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 FAM131CQ96AQ9 280 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 MIEF2Q96C03 454 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 ZNF597Q96LX8 424 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 CCDC115Q96NT0 180 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 GBP5Q96PP8 586 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 SLC17A9Q9BYT1 436 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 Q9H521 79 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 PHPT1Q9NRX4 125 aaPredicted RBP17.7■□□□□ 0.42
CCDC43-201ENST00000315286 SAC3D1A6NKF1 404 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 H0YJX3 145 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 SOCS2O14508 198 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 RFXANKO14593 260 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 ANXA4P09525 319 aaPredicted RBP17.7■□□□□ 0.42
CCDC43-201ENST00000315286 COX7A2P14406 83 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 PON2Q15165 354 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 TMEM259Q4ZIN3 620 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 PRAMEF14Q5SWL7 426 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 PRAMEF13Q5VWM6 474 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 ANKRD26P1Q6NSI1 321 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 MSANTD1Q6ZTZ1 278 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 ZNF740Q8NDX6 193 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 FIG4Q92562 907 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 CENPNQ96H22 339 aaPredicted RBP17.7■□□□□ 0.42
CCDC43-201ENST00000315286 CENPKQ9BS16 269 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 UBAP1Q9NZ09 502 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 PCDHGB4Q9UN71 923 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 BTBD3Q9Y2F9 522 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 PCDHGB5Q9Y5G0 923 aa17.7■□□□□ 0.42
CCDC43-201ENST00000315286 ELOVL7A1L3X0 281 aa17.69■□□□□ 0.42
CCDC43-201ENST00000315286 FOXE1O00358 373 aaPredicted RBP17.69■□□□□ 0.42
CCDC43-201ENST00000315286 GSTA4O15217 222 aa17.69■□□□□ 0.42
CCDC43-201ENST00000315286 SCN2BO60939 215 aa17.69■□□□□ 0.42
CCDC43-201ENST00000315286 RNGTTO60942 597 aaKnown RBP17.69■□□□□ 0.42
CCDC43-201ENST00000315286 KLF8O95600 359 aaPredicted RBP17.69■□□□□ 0.42
CCDC43-201ENST00000315286 MT-ND1P03886 318 aa17.69■□□□□ 0.42
CCDC43-201ENST00000315286 ACP5P13686 325 aa17.69■□□□□ 0.42
CCDC43-201ENST00000315286 HOXB2P14652 356 aa17.69■□□□□ 0.42
CCDC43-201ENST00000315286 CCT8P50990 548 aa17.69■□□□□ 0.42
CCDC43-201ENST00000315286 CLCNKAP51800 687 aa17.69■□□□□ 0.42
CCDC43-201ENST00000315286 POLE2P56282 527 aa17.69■□□□□ 0.42
CCDC43-201ENST00000315286 HIST2H2ACQ16777 129 aaPredicted RBP17.69■□□□□ 0.42
CCDC43-201ENST00000315286 DPY19L1Q2PZI1 675 aa17.69■□□□□ 0.42
CCDC43-201ENST00000315286 SPIN4Q56A73 249 aa17.69■□□□□ 0.42
CCDC43-201ENST00000315286 HIST2H2AA3Q6FI13 130 aa17.69■□□□□ 0.42
CCDC43-201ENST00000315286 PPP4R4Q6NUP7 873 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms