RNA–Protein interactions for RNA: ENST00000310232.10

CCDC13-201, Transcript of coiled-coil domain containing 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC13, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-201ENST00000310232 MAGIXQ9H6Y5 334 aa13.04□□□□□ -0.32
CCDC13-201ENST00000310232 REEP1Q9H902 201 aa13.04□□□□□ -0.32
CCDC13-201ENST00000310232 TM9SF3Q9HD45 589 aa13.04□□□□□ -0.32
CCDC13-201ENST00000310232 FNIP2Q9P278 1114 aa13.04□□□□□ -0.32
CCDC13-201ENST00000310232 TNPO3Q9Y5L0 923 aaKnown RBP13.04□□□□□ -0.32
CCDC13-201ENST00000310232 MYOFQ9NZM1 2061 aa13.04□□□□□ -0.32
CCDC13-201ENST00000310232 DYRK3O43781 588 aa13.04□□□□□ -0.32
CCDC13-201ENST00000310232 HOXB9P17482 250 aaPredicted RBP13.04□□□□□ -0.32
CCDC13-201ENST00000310232 RPL17P18621 184 aaKnown RBP13.04□□□□□ -0.32
CCDC13-201ENST00000310232 FPR1P21462 350 aa13.04□□□□□ -0.32
CCDC13-201ENST00000310232 GRK3P35626 688 aa13.04□□□□□ -0.32
CCDC13-201ENST00000310232 IL18R1Q13478 541 aa13.04□□□□□ -0.32
CCDC13-201ENST00000310232 ZC3H12BQ5HYM0 836 aaKnown RBP13.04□□□□□ -0.32
CCDC13-201ENST00000310232 TSEN54Q7Z6J9 526 aaKnown RBP13.04□□□□□ -0.32
CCDC13-201ENST00000310232 MRPL10Q7Z7H8 261 aaKnown RBP13.04□□□□□ -0.32
CCDC13-201ENST00000310232 TSPAN33Q86UF1 283 aa13.04□□□□□ -0.32
CCDC13-201ENST00000310232 TSPYL5Q86VY4 417 aaPredicted RBP13.04□□□□□ -0.32
CCDC13-201ENST00000310232 NECTIN4Q96NY8 510 aa13.04□□□□□ -0.32
CCDC13-201ENST00000310232 MTERF1Q99551 399 aaKnown RBP13.04□□□□□ -0.32
CCDC13-201ENST00000310232 SH3GL1Q99961 368 aa13.04□□□□□ -0.32
CCDC13-201ENST00000310232 CPNE5Q9HCH3 593 aa13.04□□□□□ -0.32
CCDC13-201ENST00000310232 EHD3Q9NZN3 535 aa13.04□□□□□ -0.32
CCDC13-201ENST00000310232 RAPGEFL1Q9UHV5 662 aa13.04□□□□□ -0.32
CCDC13-201ENST00000310232 PCDHGB6Q9Y5F9 930 aa13.04□□□□□ -0.32
CCDC13-201ENST00000310232 DNMT3AQ9Y6K1 912 aaPredicted RBP13.04□□□□□ -0.32
CCDC13-201ENST00000310232 ILVBLA1L0T0 632 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 MTX2O75431 263 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 CCNDBP1O95273 360 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 ADORA3P0DMS8 318 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 ABHD18Q0P651 414 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 SMARCB1Q12824 385 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 MED22Q15528 200 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 VMACQ2NL98 169 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 ARMCX4Q5H9R4 360 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 CLLU1OSQ5K130 101 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 OR8H2Q8N162 312 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 SLC5A8Q8N695 610 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 TRPV1Q8NER1 839 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 IL17RDQ8NFM7 739 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 SPPL2AQ8TCT8 520 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 SH3KBP1Q96B97 665 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 RNF38Q9H0F5 515 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 SP140LQ9H930 580 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 TLR8Q9NR97 1041 aaKnown RBP13.03□□□□□ -0.32
CCDC13-201ENST00000310232 ARL15Q9NXU5 204 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 RHCGQ9UBD6 479 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 PCDHB5Q9Y5E4 795 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 HELZP42694 1942 aaKnown RBP13.03□□□□□ -0.32
CCDC13-201ENST00000310232 CLDN24A6NM45 220 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 SLC28A1O00337 649 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 RGS5O15539 181 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 ERN1O75460 977 aaKnown RBP13.03□□□□□ -0.32
CCDC13-201ENST00000310232 DNAJB5O75953 348 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 IGLV3-27P01718 113 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 HOXC8P31273 242 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 PIK3CBP42338 1070 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 MAPKAPK2P49137 400 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 CDC20Q12834 499 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 PROX2Q3B8N5 592 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 ATAD3CQ5T2N8 411 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 LRIF1Q5T3J3 769 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 ALG1LQ6GMV1 187 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 TRIM46Q7Z4K8 759 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 RTN4RL1Q86UN2 441 aaPredicted RBP13.03□□□□□ -0.32
CCDC13-201ENST00000310232 VRK3Q8IV63 474 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 MMAAQ8IVH4 418 aaKnown RBP13.03□□□□□ -0.32
CCDC13-201ENST00000310232 WFDC5Q8TCV5 224 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 CEP44Q9C0F1 390 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 ELOVL6Q9H5J4 265 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 OGDHLQ9ULD0 1010 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 SAMD4AQ9UPU9 718 aaKnown RBP13.03□□□□□ -0.32
CCDC13-201ENST00000310232 OARD1Q9Y530 152 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 MYO10Q9HD67 2058 aa13.03□□□□□ -0.32
CCDC13-201ENST00000310232 WWP2O00308 870 aa13.02□□□□□ -0.32
CCDC13-201ENST00000310232 LRRTM2O43300 516 aa13.02□□□□□ -0.32
CCDC13-201ENST00000310232 IDH3BO43837 385 aa13.02□□□□□ -0.32
CCDC13-201ENST00000310232 ACSL4O60488 711 aa13.02□□□□□ -0.32
CCDC13-201ENST00000310232 STK16O75716 305 aa13.02□□□□□ -0.32
CCDC13-201ENST00000310232 GBAP04062 536 aa13.02□□□□□ -0.32
CCDC13-201ENST00000310232 LAMP1P11279 417 aa13.02□□□□□ -0.32
CCDC13-201ENST00000310232 CLDN8P56748 225 aa13.02□□□□□ -0.32
CCDC13-201ENST00000310232 HSPA14Q0VDF9 509 aa13.02□□□□□ -0.32
CCDC13-201ENST00000310232 ST3GAL4Q11206 333 aa13.02□□□□□ -0.32
CCDC13-201ENST00000310232 MAP2K5Q13163 448 aa13.02□□□□□ -0.32
CCDC13-201ENST00000310232 UGT8Q16880 541 aa13.02□□□□□ -0.32
CCDC13-201ENST00000310232 NEK5Q6P3R8 708 aa13.02□□□□□ -0.32
CCDC13-201ENST00000310232 ZNF852Q6ZMS4 543 aa13.02□□□□□ -0.32
CCDC13-201ENST00000310232 CYP2U1Q7Z449 544 aa13.02□□□□□ -0.32
CCDC13-201ENST00000310232 CDK5RAP1Q96SZ6 601 aaKnown RBP13.02□□□□□ -0.32
CCDC13-201ENST00000310232 MMP27Q9H306 513 aa13.02□□□□□ -0.32
CCDC13-201ENST00000310232 IL26Q9NPH9 171 aa13.02□□□□□ -0.32
CCDC13-201ENST00000310232 TBC1D14Q9P2M4 693 aa13.02□□□□□ -0.32
CCDC13-201ENST00000310232 PCDHB8Q9UN66 801 aa13.02□□□□□ -0.32
CCDC13-201ENST00000310232 SLC22A14Q9Y267 594 aa13.02□□□□□ -0.32
CCDC13-201ENST00000310232 ALPK3Q96L96 1907 aa13.02□□□□□ -0.32
CCDC13-201ENST00000310232 WNT9AO14904 365 aa13.02□□□□□ -0.33
CCDC13-201ENST00000310232 HOXC11O43248 304 aaPredicted RBP13.02□□□□□ -0.33
CCDC13-201ENST00000310232 SMAD6O43541 496 aaKnown RBP13.02□□□□□ -0.33
CCDC13-201ENST00000310232 KDELR3O43731 214 aa13.02□□□□□ -0.33
CCDC13-201ENST00000310232 KIAA0513O60268 411 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms