RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 OR4K1Q8NGD4 311 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 NEIL2Q969S2 332 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 UBE2E3Q969T4 207 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 RERGQ96A58 199 aaPredicted RBP17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 ZNF578Q96N58 590 aaPredicted RBP17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 EFCAB11Q9BUY7 163 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 ERVK-6Q9BXR3 956 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 TMBIM4Q9HC24 238 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 SLC6A20Q9NP91 592 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 OCIAD1Q9NX40 245 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 ACSL6Q9UKU0 697 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 AK5Q9Y6K8 562 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 COL27A1Q8IZC6 1860 aaPredicted RBP17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 IGKV1-8A0A0C4DH67 115 aa17.17■□□□□ 0.34
SSSCA1-201ENST00000309328 TRABD2BA6NFA1 517 aa17.17■□□□□ 0.34
SSSCA1-201ENST00000309328 A8MT66 165 aa17.17■□□□□ 0.34
SSSCA1-201ENST00000309328 H3BQF6 201 aa17.17■□□□□ 0.34
SSSCA1-201ENST00000309328 H7BY64 318 aa17.17■□□□□ 0.34
SSSCA1-201ENST00000309328 PRPF4O43172 522 aaKnown RBP eCLIP17.17■□□□□ 0.34
SSSCA1-201ENST00000309328 ZWINTO95229 277 aa17.17■□□□□ 0.34
SSSCA1-201ENST00000309328 CDH1P12830 882 aa17.17■□□□□ 0.34
SSSCA1-201ENST00000309328 CCL4P13236 92 aa17.17■□□□□ 0.34
SSSCA1-201ENST00000309328 FOLR1P15328 257 aa17.17■□□□□ 0.34
SSSCA1-201ENST00000309328 CASP2P42575 452 aa17.17■□□□□ 0.34
SSSCA1-201ENST00000309328 GDF5P43026 501 aa17.17■□□□□ 0.34
SSSCA1-201ENST00000309328 PRKAA2P54646 552 aa17.17■□□□□ 0.34
SSSCA1-201ENST00000309328 ITGA1P56199 1179 aa17.17■□□□□ 0.34
SSSCA1-201ENST00000309328 ZIC1Q15915 447 aa17.17■□□□□ 0.34
SSSCA1-201ENST00000309328 AGBL2Q5U5Z8 902 aa17.17■□□□□ 0.34
SSSCA1-201ENST00000309328 EXOC3L1Q86VI1 746 aa17.17■□□□□ 0.34
SSSCA1-201ENST00000309328 MCATQ8IVS2 390 aaKnown RBP17.17■□□□□ 0.34
SSSCA1-201ENST00000309328 ZNF501Q96CX3 271 aaPredicted RBP17.17■□□□□ 0.34
SSSCA1-201ENST00000309328 PHF21BQ96EK2 531 aa17.17■□□□□ 0.34
SSSCA1-201ENST00000309328 WDR34Q96EX3 536 aa17.17■□□□□ 0.34
SSSCA1-201ENST00000309328 PTCD3Q96EY7 689 aaKnown RBP17.17■□□□□ 0.34
SSSCA1-201ENST00000309328 PRAP1Q96NZ9 151 aa17.17■□□□□ 0.34
SSSCA1-201ENST00000309328 SELENOSQ9BQE4 189 aa17.17■□□□□ 0.34
SSSCA1-201ENST00000309328 NLNQ9BYT8 704 aa17.17■□□□□ 0.34
SSSCA1-201ENST00000309328 SRPK3Q9UPE1 567 aa17.17■□□□□ 0.34
SSSCA1-201ENST00000309328 TRBC2A0A5B9 178 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 CDRT15L2A8MXV6 281 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 TMEM150CB9EJG8 249 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 E7EQ34 232 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 TYROBPO43914 113 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 SBK3P0C264 359 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 C1GALT1C1LP0DN25 315 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 CPA3P15088 417 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 HPDP32754 393 aaPredicted RBP17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 AHRP35869 848 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 AGTR2P50052 363 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 MAPK10P53779 464 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 SLC18A1P54219 525 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 EMP3P54852 163 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 DNAJB13P59910 316 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 SH3BP2P78314 561 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 CSNK1G2P78368 415 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 E2F2Q14209 437 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 MANEAQ5SRI9 462 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 C10orf62Q5T681 223 aaPredicted RBP17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 C16orf46Q6P387 395 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 FOXR1Q6PIV2 292 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 TMPRSS11BQ86T26 416 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 FAM20CQ8IXL6 584 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 L3HYPDHQ96EM0 354 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 PRR11Q96HE9 360 aaPredicted RBP17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 ZNF285Q96NJ3 590 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 KLHL25Q9H0H3 589 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 NT5DC2Q9H857 520 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 FAM60AQ9NP50 221 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 COPG2Q9UBF2 871 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 PILRAQ9UKJ1 303 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 EMCNQ9ULC0 261 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 PCDHB3Q9Y5E6 796 aa17.16■□□□□ 0.34
SSSCA1-201ENST00000309328 E2F3O00716 465 aa17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 DLX3O60479 287 aa17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 OR2B3O76000 313 aa17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 MLYCDO95822 493 aa17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 RPS17P08708 135 aaKnown RBP17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 HGFP14210 728 aa17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 ITIH1P19827 911 aa17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 IMPDH1P20839 514 aa17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 EEF1DP29692 281 aaKnown RBP17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 SERPINB1P30740 379 aa17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 HNF4AP41235 474 aa17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 GABRA4P48169 554 aa17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 ARSFP54793 590 aa17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 REEP5Q00765 189 aa17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 IRF8Q02556 426 aa17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 GTF2H2Q13888 395 aa17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 KCNAB1Q14722 419 aa17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 GRM7Q14831 915 aa17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 HIST2H2ACQ16777 129 aaPredicted RBP17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 LIPJQ5W064 366 aa17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 HIST2H2AA3Q6FI13 130 aa17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 GTF2H2CQ6P1K8 395 aa17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 SLCO4C1Q6ZQN7 724 aa17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 TEX9Q8N6V9 391 aa17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 TCP10LQ8TDR4 215 aa17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 PPP4R1Q8TF05 950 aa17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 USP7Q93009 1102 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms