RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 ABCB1P08183 1280 aaPredicted RBP10.99□□□□□ -0.65
SCG2-201ENST00000305409 GNAO1P09471 354 aa10.99□□□□□ -0.65
SCG2-201ENST00000305409 ANXA4P09525 319 aaPredicted RBP10.99□□□□□ -0.65
SCG2-201ENST00000305409 PRPS2P11908 318 aa10.99□□□□□ -0.65
SCG2-201ENST00000305409 CDH1P12830 882 aa10.99□□□□□ -0.65
SCG2-201ENST00000305409 COL9A1P20849 921 aa10.99□□□□□ -0.65
SCG2-201ENST00000305409 KIR2DL1P43626 348 aaPredicted RBP10.99□□□□□ -0.65
SCG2-201ENST00000305409 KIR3DL1P43629 444 aa10.99□□□□□ -0.65
SCG2-201ENST00000305409 CLCNKAP51800 687 aa10.99□□□□□ -0.65
SCG2-201ENST00000305409 CHN2P52757 468 aa10.99□□□□□ -0.65
SCG2-201ENST00000305409 PNLIPRP1P54315 467 aa10.99□□□□□ -0.65
SCG2-201ENST00000305409 IRX1P78414 480 aaPredicted RBP10.99□□□□□ -0.65
SCG2-201ENST00000305409 MC1RQ01726 317 aa10.99□□□□□ -0.65
SCG2-201ENST00000305409 TMEM196Q5HYL7 178 aa10.99□□□□□ -0.65
SCG2-201ENST00000305409 OTUD3Q5T2D3 398 aaPredicted RBP10.99□□□□□ -0.65
SCG2-201ENST00000305409 TBPL2Q6SJ96 375 aa10.99□□□□□ -0.65
SCG2-201ENST00000305409 MMP21Q8N119 569 aa10.99□□□□□ -0.65
SCG2-201ENST00000305409 CHCHD4Q8N4Q1 142 aa10.99□□□□□ -0.65
SCG2-201ENST00000305409 CATSPER1Q8NEC5 780 aa10.99□□□□□ -0.65
SCG2-201ENST00000305409 WDR48Q8TAF3 677 aa10.99□□□□□ -0.65
SCG2-201ENST00000305409 HM13Q8TCT9 377 aa10.99□□□□□ -0.65
SCG2-201ENST00000305409 ELSPBP1Q96BH3 223 aa10.99□□□□□ -0.65
SCG2-201ENST00000305409 YIPF3Q9GZM5 350 aa10.99□□□□□ -0.65
SCG2-201ENST00000305409 XKR8Q9H6D3 395 aa10.99□□□□□ -0.65
SCG2-201ENST00000305409 ASIC5Q9NY37 505 aa10.99□□□□□ -0.65
SCG2-201ENST00000305409 DYRK1BQ9Y463 629 aa10.99□□□□□ -0.65
SCG2-201ENST00000305409 MUC22E2RYF6 1773 aaPredicted RBP10.98□□□□□ -0.65
SCG2-201ENST00000305409 A0A1W2PQU0 124 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 H0YIV9 168 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 HNRNPRO43390 633 aaKnown RBP10.98□□□□□ -0.65
SCG2-201ENST00000305409 EGFP01133 1207 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 NPPAP01160 153 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 PIM1P11309 404 aaPredicted RBP10.98□□□□□ -0.65
SCG2-201ENST00000305409 ATP6V1B1P15313 513 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 GGT1P19440 569 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 PAX7P23759 505 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 PTPN6P29350 595 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 MYBPC1Q00872 1141 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 TFF2Q03403 129 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 C16orf72Q14CZ0 275 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 PON2Q15165 354 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 MED27Q6P2C8 311 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 RNF165Q6ZSG1 346 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 PLD3Q8IV08 490 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 ZNF548Q8NEK5 533 aaPredicted RBP10.98□□□□□ -0.65
SCG2-201ENST00000305409 OR8J3Q8NGG0 315 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 NETO1Q8TDF5 533 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 JPH3Q8WXH2 748 aaPredicted RBP10.98□□□□□ -0.65
SCG2-201ENST00000305409 PANX1Q96RD7 426 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 DPH2Q9BQC3 489 aaPredicted RBP10.98□□□□□ -0.65
SCG2-201ENST00000305409 SH3BP4Q9P0V3 963 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 TAC3Q9UHF0 121 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 VPS4AQ9UN37 437 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 PCDHGA11Q9Y5H2 935 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 TBC1D3DA0A087WVF3 549 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 TBC1D3IA0A087WXS9 549 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 TBC1D3EA0A087X179 549 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 TBC1D3KA0A087X1G2 549 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 FEZF1A0PJY2 475 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 TBC1D3FA6NER0 549 aaPredicted RBP10.98□□□□□ -0.65
SCG2-201ENST00000305409 GABRR3A8MPY1 467 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 TBC1D3LB9A6J9 549 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 EI24O14681 340 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 DENRO43583 198 aaKnown RBP10.98□□□□□ -0.65
SCG2-201ENST00000305409 VEGFDO43915 354 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 ADAM23O75077 832 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 ANXA6P08133 673 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 TBC1D3HP0C7X1 549 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 BMP2P12643 396 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 CD72P21854 359 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 HNF4AP41235 474 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 WNT3P56703 355 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 ADAM15Q13444 863 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 CAMK2GQ13555 558 aaPredicted RBP10.98□□□□□ -0.65
SCG2-201ENST00000305409 RBBP5Q15291 538 aaKnown RBP10.98□□□□□ -0.65
SCG2-201ENST00000305409 SMU1Q2TAY7 513 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 AASDHQ4L235 1098 aaPredicted RBP10.98□□□□□ -0.65
SCG2-201ENST00000305409 TBC1D3GQ6DHY5 549 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 TBC1D3CQ6IPX1 549 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 ARMCX6Q7L4S7 300 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 LRRTM4Q86VH4 590 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 TMEM126BQ8IUX1 230 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 LRRC56Q8IYG6 542 aaPredicted RBP10.98□□□□□ -0.65
SCG2-201ENST00000305409 TBC1D3Q8IZP1 549 aaPredicted RBP10.98□□□□□ -0.65
SCG2-201ENST00000305409 KIAA1958Q8N8K9 716 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 ANKFN1Q8N957 763 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 SLC5A11Q8WWX8 675 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 FAM162AQ96A26 154 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 FAM120BQ96EK7 910 aaKnown RBP10.98□□□□□ -0.65
SCG2-201ENST00000305409 GBP5Q96PP8 586 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 WDR26Q9H7D7 661 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 KAT8Q9H7Z6 458 aaKnown RBP10.98□□□□□ -0.65
SCG2-201ENST00000305409 CCDC177Q9NQR7 707 aaPredicted RBP10.98□□□□□ -0.65
SCG2-201ENST00000305409 CUEDC1Q9NWM3 386 aaPredicted RBP10.98□□□□□ -0.65
SCG2-201ENST00000305409 RAB26Q9ULW5 256 aa10.98□□□□□ -0.65
SCG2-201ENST00000305409 TRBV5-3A0A0A0MS03 114 aa10.97□□□□□ -0.65
SCG2-201ENST00000305409 ELOVL7A1L3X0 281 aa10.97□□□□□ -0.65
SCG2-201ENST00000305409 PIPSLA2A3N6 862 aa10.97□□□□□ -0.65
SCG2-201ENST00000305409 H3BQ06 376 aaPredicted RBP10.97□□□□□ -0.65
SCG2-201ENST00000305409 RTCAO00442 366 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms