RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 ZNF615Q8N8J6 731 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 OR52E4Q8NGH9 312 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 UBE2QL1A1L167 161 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 A6NLC8 198 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 FADS2P1A8MWK0 482 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 BPNT1O95861 308 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 IFNW1P05000 195 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 CDKL1Q00532 357 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 LASP1Q14847 261 aaKnown RBP7.59□□□□□ -1.19
SCN9A-201ENST00000303354 SCGB2B2Q4G0G5 96 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 TMEM198Q66K66 360 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 LIN54Q6MZP7 749 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 SLC2A7Q6PXP3 512 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 LRRC69Q6ZNQ3 347 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 CDH24Q86UP0 819 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 DEPDC4Q8N2C3 294 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 OR4F6Q8NGB9 312 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 MAP3K3Q99759 626 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 SAMD4AQ9UPU9 718 aaKnown RBP7.59□□□□□ -1.19
SCN9A-201ENST00000303354 COMMD3-BMI1R4GMX3 469 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 CCNB2O95067 398 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 KAT7O95251 611 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 KHKP50053 298 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 OR4D2P58180 307 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 DLG1Q12959 904 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 RBM44Q6ZP01 1051 aaKnown RBP7.59□□□□□ -1.19
SCN9A-201ENST00000303354 GOLGA7Q7Z5G4 137 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 ZNF461Q8TAF7 563 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 ADAMTS10Q9H324 1103 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 CRTAC1Q9NQ79 661 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.59□□□□□ -1.2
SCN9A-201ENST00000303354 TNFSF12O43508 249 aa7.59□□□□□ -1.2
SCN9A-201ENST00000303354 TIMP1P01033 207 aa7.59□□□□□ -1.2
SCN9A-201ENST00000303354 PTGER3P43115 390 aa7.59□□□□□ -1.2
SCN9A-201ENST00000303354 SLC6A11P48066 632 aa7.59□□□□□ -1.2
SCN9A-201ENST00000303354 ARFRP1Q13795 201 aa7.59□□□□□ -1.2
SCN9A-201ENST00000303354 SLC9A4Q6AI14 798 aa7.59□□□□□ -1.2
SCN9A-201ENST00000303354 AAGABQ6PD74 315 aa7.59□□□□□ -1.2
SCN9A-201ENST00000303354 ABRAXAS1Q6UWZ7 409 aa7.59□□□□□ -1.2
SCN9A-201ENST00000303354 ZNF852Q6ZMS4 543 aa7.59□□□□□ -1.2
SCN9A-201ENST00000303354 FUKQ8N0W3 1084 aa7.59□□□□□ -1.2
SCN9A-201ENST00000303354 C1orf216Q8TAB5 229 aa7.59□□□□□ -1.2
SCN9A-201ENST00000303354 IL4I1Q96RQ9 567 aa7.59□□□□□ -1.2
SCN9A-201ENST00000303354 TTYH3Q9C0H2 523 aa7.59□□□□□ -1.2
SCN9A-201ENST00000303354 TCF7L1Q9HCS4 588 aa7.59□□□□□ -1.2
SCN9A-201ENST00000303354 APOL3O95236 402 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 THEGLP0DJG4 465 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 GPD2P43304 727 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 ERN2Q76MJ5 926 aaKnown RBP7.58□□□□□ -1.2
SCN9A-201ENST00000303354 TM9SF2Q99805 663 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 SCML2Q9UQR0 700 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 CAPN14A8MX76 684 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 TNFAIP8O95379 198 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 RAB25P57735 213 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 ELF3P78545 371 aaPredicted RBP7.58□□□□□ -1.2
SCN9A-201ENST00000303354 EIF1ADQ8N9N8 165 aaKnown RBP7.58□□□□□ -1.2
SCN9A-201ENST00000303354 ENOPH1Q9UHY7 261 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 AGLP35573 1532 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 RTCAO00442 366 aaKnown RBP7.58□□□□□ -1.2
SCN9A-201ENST00000303354 NR2F6P10588 404 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 CD53P19397 219 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 MAP3K8P41279 467 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 HNRNPDQ14103 355 aaKnown RBP7.58□□□□□ -1.2
SCN9A-201ENST00000303354 AGAP11Q8TF27 550 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 ZNF775Q96BV0 537 aaPredicted RBP7.58□□□□□ -1.2
SCN9A-201ENST00000303354 COX4I2Q96KJ9 171 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 FARSAQ9Y285 508 aaKnown RBP7.58□□□□□ -1.2
SCN9A-201ENST00000303354 PLLPQ9Y342 182 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 BAZ2BQ9UIF8 2168 aaKnown RBP7.58□□□□□ -1.2
SCN9A-201ENST00000303354 ZNF879B4DU55 563 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 HCRTR2O43614 444 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 DNAJA2O60884 412 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 TSPAN9O75954 239 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 HCKP08631 526 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 PIM1P11309 404 aaPredicted RBP7.58□□□□□ -1.2
SCN9A-201ENST00000303354 GNAZP19086 355 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 CRHR1P34998 444 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 ZDHHC21Q8IVQ6 265 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 TERB1Q8NA31 727 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 ZNF527Q8NB42 609 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 CXorf56Q9H5V9 222 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 PRDM8Q9NQV8 689 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 KCMF1Q9P0J7 381 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 GNEQ9Y223 722 aaKnown RBP7.58□□□□□ -1.2
SCN9A-201ENST00000303354 FAM172BPA6NC97 362 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 ANKRD66B4E2M5 251 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 CXCR6O00574 342 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 TSPAN6O43657 245 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 ADH1BP00325 375 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 ACADLP28330 430 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 RPS15P62841 145 aaKnown RBP7.58□□□□□ -1.2
SCN9A-201ENST00000303354 SLC44A1Q8WWI5 657 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 PDP2Q9P2J9 529 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 ANXA2P2A6NMY6 339 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 E2F3O00716 465 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 HOXB8P17481 243 aaPredicted RBP7.58□□□□□ -1.2
SCN9A-201ENST00000303354 C4BPBP20851 252 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 PAX3P23760 479 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 GALK2Q01415 458 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 UPP1Q16831 310 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms