RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 NKG7Q16617 165 aa15.41■□□□□ 0.06
SMAD6-201ENST00000288840 COQ5Q5HYK3 327 aa15.41■□□□□ 0.06
SMAD6-201ENST00000288840 ADNP2Q6IQ32 1131 aa15.41■□□□□ 0.06
SMAD6-201ENST00000288840 C11orf65Q8NCR3 313 aa15.41■□□□□ 0.06
SMAD6-201ENST00000288840 RPL3LQ92901 407 aaKnown RBP15.41■□□□□ 0.06
SMAD6-201ENST00000288840 RHNO1Q9BSD3 238 aa15.41■□□□□ 0.06
SMAD6-201ENST00000288840 C11orf16Q9NQ32 467 aa15.41■□□□□ 0.06
SMAD6-201ENST00000288840 C8orf4Q9NR00 106 aa15.41■□□□□ 0.06
SMAD6-201ENST00000288840 CBFA2T3O75081 653 aa15.41■□□□□ 0.06
SMAD6-201ENST00000288840 SRCP12931 536 aa15.41■□□□□ 0.06
SMAD6-201ENST00000288840 PTGER1P34995 402 aa15.41■□□□□ 0.06
SMAD6-201ENST00000288840 NTHL1P78549 312 aa15.41■□□□□ 0.06
SMAD6-201ENST00000288840 MXD1Q05195 221 aa15.41■□□□□ 0.06
SMAD6-201ENST00000288840 SLBPQ14493 270 aaKnown RBP eCLIP15.41■□□□□ 0.06
SMAD6-201ENST00000288840 SPRED1Q7Z699 444 aa15.41■□□□□ 0.06
SMAD6-201ENST00000288840 GALNT7Q86SF2 657 aa15.41■□□□□ 0.06
SMAD6-201ENST00000288840 DCP2Q8IU60 420 aaKnown RBP15.41■□□□□ 0.06
SMAD6-201ENST00000288840 UBE2J2Q8N2K1 259 aa15.41■□□□□ 0.06
SMAD6-201ENST00000288840 XAGE5Q8WWM1 108 aa15.41■□□□□ 0.06
SMAD6-201ENST00000288840 NUAK2Q9H093 628 aa15.41■□□□□ 0.06
SMAD6-201ENST00000288840 TRIM39Q9HCM9 518 aa15.41■□□□□ 0.06
SMAD6-201ENST00000288840 HEBP1Q9NRV9 189 aa15.41■□□□□ 0.06
SMAD6-201ENST00000288840 URB1O60287 2271 aaKnown RBP15.4■□□□□ 0.06
SMAD6-201ENST00000288840 SH3PXD2BA1X283 911 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 AIREO43918 545 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 BCAS1O75363 584 aaPredicted RBP15.4■□□□□ 0.06
SMAD6-201ENST00000288840 SOX14O95416 240 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 SLC16A8O95907 504 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 APOA1P02647 267 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 TYRP14679 529 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 TNNI3P19429 210 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 CBX3Q13185 183 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 SPCS2Q15005 226 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 RBM48Q5RL73 367 aaKnown RBP15.4■□□□□ 0.06
SMAD6-201ENST00000288840 ZNF548Q8NEK5 533 aaPredicted RBP15.4■□□□□ 0.06
SMAD6-201ENST00000288840 ZNF641Q96N77 438 aaPredicted RBP15.4■□□□□ 0.06
SMAD6-201ENST00000288840 BARD1Q99728 777 aaKnown RBP15.4■□□□□ 0.06
SMAD6-201ENST00000288840 RBM38Q9H0Z9 239 aaKnown RBP15.4■□□□□ 0.06
SMAD6-201ENST00000288840 SLC25A37Q9NYZ2 338 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 TBC1D3BA6NDS4 549 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 H0YAE9 185 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 ATG13O75143 517 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 SOD2P04179 222 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 C8GP07360 202 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 EIF4EBP2Q13542 120 aaPredicted RBP15.4■□□□□ 0.06
SMAD6-201ENST00000288840 DUOXA1Q1HG43 343 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 CYP4Z1Q86W10 505 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 CHDHQ8NE62 594 aaPredicted RBP15.4■□□□□ 0.06
SMAD6-201ENST00000288840 COL26A1Q96A83 441 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 YIPF4Q9BSR8 244 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 C5AR2Q9P296 337 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 PDZK1P1A8MUH7 402 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 TTC34A8MYJ7 566 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 RTCAO00442 366 aaKnown RBP15.4■□□□□ 0.06
SMAD6-201ENST00000288840 CCNDBP1O95273 360 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 C6orf47O95873 294 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 ALPPL2P10696 532 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 ETFAP13804 333 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 CRHBPP24387 322 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 INPP1P49441 399 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 MC1RQ01726 317 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 ZNF846Q147U1 533 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 VMACQ2NL98 169 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 TYW3Q6IPR3 259 aaKnown RBP15.4■□□□□ 0.06
SMAD6-201ENST00000288840 RAB8BQ92930 207 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 NACC2Q96BF6 587 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 HEPHQ9BQS7 1158 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 CREBZFQ9NS37 354 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 HSFX1Q9UBD0 423 aa15.4■□□□□ 0.06
SMAD6-201ENST00000288840 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.39■□□□□ 0.05
SMAD6-201ENST00000288840 EFCAB9A8MZ26 197 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 HOXC8P31273 242 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 MANFP55145 182 aaKnown RBP15.39■□□□□ 0.05
SMAD6-201ENST00000288840 RPP38P78345 283 aaKnown RBP15.39■□□□□ 0.05
SMAD6-201ENST00000288840 CCSMST1Q4G0I0 132 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 NEK5Q6P3R8 708 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 TMEM179BQ7Z7N9 219 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 KLHL23Q8NBE8 558 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 NFKBIDQ8NI38 313 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 TMEM121BQ9BXQ6 578 aaPredicted RBP15.39■□□□□ 0.05
SMAD6-201ENST00000288840 AMBRA1Q9C0C7 1298 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 KCNH6Q9H252 994 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 ACTL8Q9H568 366 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 MARCH7Q9H992 704 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 PRKAG2Q9UGJ0 569 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 CCL26Q9Y258 94 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 RUVBL1Q9Y265 456 aaKnown RBP15.39■□□□□ 0.05
SMAD6-201ENST00000288840 NPPAP01160 153 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 IGLV3-27P01718 113 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 CLDN8P56748 225 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 MRPS15P82914 257 aaKnown RBP15.39■□□□□ 0.05
SMAD6-201ENST00000288840 TEAD2Q15562 447 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 RUNDC3AQ59EK9 446 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 PTCHD4Q6ZW05 846 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 CEP68Q76N32 757 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 NDNFQ8TB73 568 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 ZFYVE19Q96K21 471 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 TRBV23OR9-2A0A075B6M9 112 aa15.39■□□□□ 0.05
SMAD6-201ENST00000288840 TFECO14948 347 aaPredicted RBP15.39■□□□□ 0.05
SMAD6-201ENST00000288840 HLA-FP30511 346 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms