RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 SFXN1Q9H9B4 322 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 C12orf4Q9NQ89 552 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 POLE4Q9NR33 117 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 KCNN3Q9UGI6 736 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 POU2F3Q9UKI9 436 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 CNOT6Q9ULM6 557 aaKnown RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 POFUT2Q9Y2G5 429 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 HEMK1Q9Y5R4 338 aaPredicted RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 TEX13DA0A0J9YY54 714 aaPredicted RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 E7EQ34 232 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 ARVCFO00192 962 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 H6PDO95479 791 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 H1F0P07305 194 aaKnown RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 RNH1P13489 461 aaKnown RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 SMPD1P17405 629 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 ERP29P30040 261 aaKnown RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 PREPP48147 710 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 RPS15P62841 145 aaKnown RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 ACTC1P68032 377 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 ACTA1P68133 377 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 GALK2Q01415 458 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 MC1RQ01726 317 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 POU4F2Q12837 409 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 RCAN2Q14206 197 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 PRAMEF17Q5VTA0 474 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 FRG2Q64ET8 278 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 NPNTQ6UXI9 565 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 BAIAP2L2Q6UXY1 529 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 ZNF627Q7L945 461 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 PPP1R35Q8TAP8 253 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 ZNF641Q96N77 438 aaPredicted RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 FRG2BQ96QU4 278 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 NODALQ96S42 347 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 C11orf16Q9NQ32 467 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 MTMR10Q9NXD2 777 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 SIRPGQ9P1W8 387 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 RARRES3Q9UL19 164 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 PCDHGA10Q9Y5H3 936 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 PREX1Q8TCU6 1659 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 A0A1W2PRB8 838 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 ZNF670-ZNF695F2Z2N8 137 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 PLOD2O00469 737 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 MUSKO15146 869 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 PMM2O15305 246 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 NOS1APO75052 506 aaPredicted RBP3.96□□□□□ -1.77
SCN3A-201ENST00000283254 FHP07954 510 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 HSD3B1P14060 373 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 NRIP1P48552 1158 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 SMSP52788 366 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 DAOAP59103 153 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 KCNC4Q03721 635 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 TNFAIP8L2Q6P589 184 aaPredicted RBP3.96□□□□□ -1.77
SCN3A-201ENST00000283254 XYLT1Q86Y38 959 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 C12orf29Q8N999 325 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 SIDT2Q8NBJ9 832 aaKnown RBP3.96□□□□□ -1.77
SCN3A-201ENST00000283254 MARK4Q96L34 752 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 KCTD7Q96MP8 289 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 SYT17Q9BSW7 474 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 MAGEE1Q9HCI5 957 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 CNTN3Q9P232 1028 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 DNAJB9Q9UBS3 223 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 CDH22Q9UJ99 828 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 FCF1Q9Y324 198 aaKnown RBP3.96□□□□□ -1.77
SCN3A-201ENST00000283254 ZFP37Q9Y6Q3 630 aaPredicted RBP3.96□□□□□ -1.77
SCN3A-201ENST00000283254 KIF20BQ96Q89 1820 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 AQP12BA6NM10 295 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 TISP43B9A030 160 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 DISC1C4P0D8 188 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 LRCH4O75427 683 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 CHRNA1P02708 482 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 SYPP08247 313 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 VIPR1P32241 457 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 ARL2P36404 184 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 CCR10P46092 362 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 CLCNKAP51800 687 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 PRPF38BQ5VTL8 546 aaKnown RBP3.96□□□□□ -1.77
SCN3A-201ENST00000283254 C16orf46Q6P387 395 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 MON1BQ7L1V2 547 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 AQP12AQ8IXF9 295 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 C1orf127Q8N9H9 656 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 OR52J3Q8NH60 311 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 KLHL15Q96M94 604 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 ZNF700Q9H0M5 742 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 TBC1D17Q9HA65 648 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 MOV10Q9HCE1 1003 aaKnown RBP3.96□□□□□ -1.77
SCN3A-201ENST00000283254 CD248Q9HCU0 757 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 KCNIP1Q9NZI2 227 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 ZIM2Q9NZV7 527 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 ZFR2Q9UPR6 939 aaKnown RBP3.96□□□□□ -1.77
SCN3A-201ENST00000283254 SLC7A11Q9UPY5 501 aa3.96□□□□□ -1.77
SCN3A-201ENST00000283254 BORCS7-ASMTA0A0B4J1R7 106 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 B8ZZF3 427 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 SLC22A1O15245 554 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 ZNF217O75362 1048 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 ZSCAN5DPP0CG00 497 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 IRF2P14316 349 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 GNG2P59768 71 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 DSTNP60981 165 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 TGFBR3Q03167 851 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 GPR17Q13304 367 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms