RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 SP140Q13342 867 aa15.32■□□□□ 0.04
USE1-201ENST00000263897 RAPSNQ13702 412 aa15.32■□□□□ 0.04
USE1-201ENST00000263897 MYBPC3Q14896 1274 aa15.32■□□□□ 0.04
USE1-201ENST00000263897 HECTD2Q5U5R9 776 aa15.32■□□□□ 0.04
USE1-201ENST00000263897 GARNL3Q5VVW2 1013 aa15.32■□□□□ 0.04
USE1-201ENST00000263897 JMJD6Q6NYC1 403 aaPredicted RBP15.32■□□□□ 0.04
USE1-201ENST00000263897 KIRREL2Q6UWL6 708 aa15.32■□□□□ 0.04
USE1-201ENST00000263897 SHISA6Q6ZSJ9 500 aa15.32■□□□□ 0.04
USE1-201ENST00000263897 ANKMY2Q8IV38 441 aa15.32■□□□□ 0.04
USE1-201ENST00000263897 CSNK1A1LQ8N752 337 aa15.32■□□□□ 0.04
USE1-201ENST00000263897 STT3BQ8TCJ2 826 aa15.32■□□□□ 0.04
USE1-201ENST00000263897 RERGQ96A58 199 aaPredicted RBP15.32■□□□□ 0.04
USE1-201ENST00000263897 MIB2Q96AX9 1013 aa15.32■□□□□ 0.04
USE1-201ENST00000263897 CABS1Q96KC9 395 aa15.32■□□□□ 0.04
USE1-201ENST00000263897 PRAP1Q96NZ9 151 aa15.32■□□□□ 0.04
USE1-201ENST00000263897 PCBD2Q9H0N5 130 aa15.32■□□□□ 0.04
USE1-201ENST00000263897 SOX17Q9H6I2 414 aaPredicted RBP15.32■□□□□ 0.04
USE1-201ENST00000263897 ZNF552Q9H707 407 aaPredicted RBP15.32■□□□□ 0.04
USE1-201ENST00000263897 CCDC177Q9NQR7 707 aaPredicted RBP15.32■□□□□ 0.04
USE1-201ENST00000263897 SEMA3GQ9NS98 782 aa15.32■□□□□ 0.04
USE1-201ENST00000263897 ZNF282Q9UDV7 671 aaPredicted RBP15.32■□□□□ 0.04
USE1-201ENST00000263897 CDC23Q9UJX2 597 aa15.32■□□□□ 0.04
USE1-201ENST00000263897 CORO1CQ9ULV4 474 aaPredicted RBP15.32■□□□□ 0.04
USE1-201ENST00000263897 RUVBL1Q9Y265 456 aaKnown RBP15.32■□□□□ 0.04
USE1-201ENST00000263897 SNX24Q9Y343 169 aa15.32■□□□□ 0.04
USE1-201ENST00000263897 PRRC2CQ9Y520 2896 aaKnown RBP15.31■□□□□ 0.04
USE1-201ENST00000263897 IGLV3-12A0A075B6K2 115 aa15.31■□□□□ 0.04
USE1-201ENST00000263897 E7ESA3 106 aa15.31■□□□□ 0.04
USE1-201ENST00000263897 SOCS6O14544 535 aa15.31■□□□□ 0.04
USE1-201ENST00000263897 KLHL41O60662 606 aa15.31■□□□□ 0.04
USE1-201ENST00000263897 TSPAN12O95859 305 aa15.31■□□□□ 0.04
USE1-201ENST00000263897 HIST1H2AGP0C0S8 130 aaPredicted RBP15.31■□□□□ 0.04
USE1-201ENST00000263897 ZGLP1P0C6A0 271 aa15.31■□□□□ 0.04
USE1-201ENST00000263897 HIST1H2ADP20671 130 aa15.31■□□□□ 0.04
USE1-201ENST00000263897 FDXRP22570 491 aa15.31■□□□□ 0.04
USE1-201ENST00000263897 RPL21P46778 160 aaKnown RBP15.31■□□□□ 0.04
USE1-201ENST00000263897 CD97P48960 835 aa15.31■□□□□ 0.04
USE1-201ENST00000263897 KLC1Q07866 573 aa15.31■□□□□ 0.04
USE1-201ENST00000263897 AIMP2Q13155 320 aaKnown RBP15.31■□□□□ 0.04
USE1-201ENST00000263897 PDAP1Q13442 181 aaKnown RBP15.31■□□□□ 0.04
USE1-201ENST00000263897 PHKG1Q16816 387 aa15.31■□□□□ 0.04
USE1-201ENST00000263897 HKDC1Q2TB90 917 aa15.31■□□□□ 0.04
USE1-201ENST00000263897 VWA5B1Q5TIE3 1220 aa15.31■□□□□ 0.04
USE1-201ENST00000263897 AGTRAPQ6RW13 159 aa15.31■□□□□ 0.04
USE1-201ENST00000263897 ADCK2Q7Z695 626 aa15.31■□□□□ 0.04
USE1-201ENST00000263897 PLD3Q8IV08 490 aa15.31■□□□□ 0.04
USE1-201ENST00000263897 RBMXL3Q8N7X1 1067 aaKnown RBP15.31■□□□□ 0.04
USE1-201ENST00000263897 GPATCH11Q8N954 259 aa15.31■□□□□ 0.04
USE1-201ENST00000263897 MVB12AQ96EY5 273 aa15.31■□□□□ 0.04
USE1-201ENST00000263897 LINGO1Q96FE5 620 aa15.31■□□□□ 0.04
USE1-201ENST00000263897 HIST1H2AHQ96KK5 128 aa15.31■□□□□ 0.04
USE1-201ENST00000263897 HIST1H2AJQ99878 128 aa15.31■□□□□ 0.04
USE1-201ENST00000263897 H2AFJQ9BTM1 129 aa15.31■□□□□ 0.04
USE1-201ENST00000263897 ATG10Q9H0Y0 220 aa15.31■□□□□ 0.04
USE1-201ENST00000263897 MOCS1Q9NZB8 636 aa15.31■□□□□ 0.04
USE1-201ENST00000263897 HS3ST3B1Q9Y662 390 aa15.31■□□□□ 0.04
USE1-201ENST00000263897 HECTD1Q9ULT8 2610 aa15.31■□□□□ 0.04
USE1-201ENST00000263897 LRRK2Q5S007 2527 aa15.31■□□□□ 0.04
USE1-201ENST00000263897 KCNE1BA0A087WTH5 132 aa15.3■□□□□ 0.04
USE1-201ENST00000263897 NDC80O14777 642 aa15.3■□□□□ 0.04
USE1-201ENST00000263897 HAT1O14929 419 aa15.3■□□□□ 0.04
USE1-201ENST00000263897 SORBS2O94875 1100 aaKnown RBP15.3■□□□□ 0.04
USE1-201ENST00000263897 FBLP22087 321 aaKnown RBP15.3■□□□□ 0.04
USE1-201ENST00000263897 PGGT1BP53609 377 aa15.3■□□□□ 0.04
USE1-201ENST00000263897 TBPL1P62380 186 aa15.3■□□□□ 0.04
USE1-201ENST00000263897 MGAT5Q09328 741 aa15.3■□□□□ 0.04
USE1-201ENST00000263897 NAE1Q13564 534 aa15.3■□□□□ 0.04
USE1-201ENST00000263897 RBBP7Q16576 425 aa15.3■□□□□ 0.04
USE1-201ENST00000263897 VWA2Q5GFL6 755 aa15.3■□□□□ 0.04
USE1-201ENST00000263897 NUP210LQ5VU65 1888 aa15.3■□□□□ 0.04
USE1-201ENST00000263897 PRAMEF13Q5VWM6 474 aa15.3■□□□□ 0.04
USE1-201ENST00000263897 FAM45BPQ6NSW5 357 aa15.3■□□□□ 0.04
USE1-201ENST00000263897 IGFL3Q6UXB1 125 aa15.3■□□□□ 0.04
USE1-201ENST00000263897 MBOAT1Q6ZNC8 495 aa15.3■□□□□ 0.04
USE1-201ENST00000263897 ARHGEF39Q8N4T4 335 aa15.3■□□□□ 0.04
USE1-201ENST00000263897 BBOF1Q8ND07 529 aa15.3■□□□□ 0.04
USE1-201ENST00000263897 FBXO36Q8NEA4 188 aa15.3■□□□□ 0.04
USE1-201ENST00000263897 FAM45AQ8TCE6 357 aa15.3■□□□□ 0.04
USE1-201ENST00000263897 MIEF2Q96C03 454 aa15.3■□□□□ 0.04
USE1-201ENST00000263897 PDLIM5Q96HC4 596 aaKnown RBP15.3■□□□□ 0.04
USE1-201ENST00000263897 OLFM1Q99784 485 aa15.3■□□□□ 0.04
USE1-201ENST00000263897 MFRPQ9BY79 579 aa15.3■□□□□ 0.04
USE1-201ENST00000263897 ZFATQ9P243 1243 aa15.3■□□□□ 0.04
USE1-201ENST00000263897 FBXL4Q9UKA2 621 aa15.3■□□□□ 0.04
USE1-201ENST00000263897 PTPN13Q12923 2485 aa15.29■□□□□ 0.04
USE1-201ENST00000263897 FAM187AA6NFU0 413 aa15.29■□□□□ 0.04
USE1-201ENST00000263897 PRPF4O43172 522 aaKnown RBP eCLIP15.29■□□□□ 0.04
USE1-201ENST00000263897 FOXS1O43638 330 aa15.29■□□□□ 0.04
USE1-201ENST00000263897 ALPPP05187 535 aa15.29■□□□□ 0.04
USE1-201ENST00000263897 NPPBP16860 134 aa15.29■□□□□ 0.04
USE1-201ENST00000263897 CCND1P24385 295 aa15.29■□□□□ 0.04
USE1-201ENST00000263897 SLC26A3P40879 764 aa15.29■□□□□ 0.04
USE1-201ENST00000263897 RPS15AP62244 130 aaKnown RBP15.29■□□□□ 0.04
USE1-201ENST00000263897 CSNK1G2P78368 415 aa15.29■□□□□ 0.04
USE1-201ENST00000263897 MRPS25P82663 173 aaKnown RBP15.29■□□□□ 0.04
USE1-201ENST00000263897 DSG2Q14126 1118 aa15.29■□□□□ 0.04
USE1-201ENST00000263897 FAM53BQ14153 422 aa15.29■□□□□ 0.04
USE1-201ENST00000263897 FASTKD3Q14CZ7 662 aaKnown RBP15.29■□□□□ 0.04
USE1-201ENST00000263897 ZXDCQ2QGD7 858 aaPredicted RBP15.29■□□□□ 0.04
USE1-201ENST00000263897 LAPTM4BQ86VI4 370 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms