RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 SUOXP51687 545 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 PPP5CP53041 499 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 DEFA1P59665 94 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 DEFA3P59666 94 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 ST3GAL4Q11206 333 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 MAD2L1BPQ15013 274 aaPredicted RBP11.61□□□□□ -0.55
USHBP1-201ENST00000252597 KCNA10Q16322 511 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 RBFAQ8N0V3 343 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 CAMKK1Q8N5S9 505 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 AADATQ8N5Z0 425 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 DTX3Q8N9I9 347 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 SLC35B4Q969S0 331 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 ISG20Q96AZ6 181 aaKnown RBP11.61□□□□□ -0.55
USHBP1-201ENST00000252597 EID2BQ96D98 161 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 MYO19Q96H55 970 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 DEPDC7Q96QD5 511 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 ACAT2Q9BWD1 397 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 MAGEH1Q9H213 219 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 TRIT1Q9H3H1 467 aaKnown RBP11.61□□□□□ -0.55
USHBP1-201ENST00000252597 GORASP2Q9H8Y8 452 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 SPATA7Q9P0W8 599 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 FZD4Q9ULV1 537 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 PPT2Q9UMR5 302 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 DNAH14Q0VDD8 3507 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 EPOP01588 193 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 SDC1P18827 310 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 PTNP21246 168 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 PCMT1P22061 227 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 DNAJA1P31689 397 aaKnown RBP11.61□□□□□ -0.55
USHBP1-201ENST00000252597 RAB25P57735 213 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 CYP4F8P98187 520 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 RFX4Q33E94 735 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 SLC34A3Q8N130 599 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 VPS35Q96QK1 796 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 POPDC3Q9HBV1 291 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 GIMAP4Q9NUV9 329 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 ADPRHL2Q9NX46 363 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 TOR4AQ9NXH8 423 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 PCDHB8Q9UN66 801 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 CNTRLQ7Z7A1 2325 aa11.61□□□□□ -0.55
USHBP1-201ENST00000252597 TTC34A8MYJ7 566 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 ANKRD28O15084 1053 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 SNX4O95219 450 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 SSTR4P31391 388 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 HTR7P34969 479 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 CSKP41240 450 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 SLC35A2P78381 396 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 GRIK2Q13002 908 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 DSC3Q14574 896 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 TTLL9Q3SXZ7 439 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 RTP2Q5QGT7 225 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 SERPINA13PQ6UXR4 307 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 TAS1R1Q7RTX1 841 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 C11orf96Q7Z7L8 435 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 STK40Q8N2I9 435 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 MFSD4AQ8N468 514 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 SLC5A8Q8N695 610 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 RHOXF1Q8NHV9 184 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 OTUB1Q96FW1 271 aaPredicted RBP11.6□□□□□ -0.55
USHBP1-201ENST00000252597 MGME1Q9BQP7 344 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 IL26Q9NPH9 171 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 ZNF639Q9UID6 485 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 SLC6A14Q9UN76 642 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 MTMR11A4FU01 709 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 EFCAB10A6NFE3 127 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 M0QZQ0 153 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 ARNTLO00327 626 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 HPRP00739 348 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 ALDH2P05091 517 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 ZNF24P17028 368 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 GJA1P17302 382 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 TGM1P22735 817 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 MAPKAPK2P49137 400 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 MEF2AQ02078 507 aaPredicted RBP11.6□□□□□ -0.55
USHBP1-201ENST00000252597 GBX1Q14549 363 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 MORN1Q5T089 497 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 GPR149Q86SP6 731 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 TMEM173Q86WV6 379 aaPredicted RBP11.6□□□□□ -0.55
USHBP1-201ENST00000252597 MEX3DQ86XN8 651 aaKnown RBP11.6□□□□□ -0.55
USHBP1-201ENST00000252597 LYSMD2Q8IV50 215 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 DYNC2LI1Q8TCX1 351 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 ZNF675Q8TD23 568 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 TPT1P8Q9HAU6 139 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 KLHL20Q9Y2M5 609 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 PRKAB1Q9Y478 270 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 UGT2A1Q9Y4X1 527 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 WWP2O00308 870 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 ERN1O75460 977 aaKnown RBP11.6□□□□□ -0.55
USHBP1-201ENST00000252597 PTHP01270 115 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 GRK5P34947 590 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 OR2B6P58173 313 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 CD83Q01151 205 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 NAE1Q13564 534 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 STARD3Q14849 445 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 VMACQ2NL98 169 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 HECTD3Q5T447 861 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 CCDC80Q76M96 950 aa11.6□□□□□ -0.55
USHBP1-201ENST00000252597 ZNF551Q7Z340 670 aaPredicted RBP11.6□□□□□ -0.55
USHBP1-201ENST00000252597 BCDIN3DQ7Z5W3 292 aaKnown RBP11.6□□□□□ -0.55
USHBP1-201ENST00000252597 SIX5Q8N196 739 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms