RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 CATSPERZQ9NTU4 200 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 MARCH4Q9P2E8 410 aaPredicted RBP6.13□□□□□ -1.43
SGIP1-201ENST00000237247 TSR3Q9UJK0 312 aaKnown RBP6.13□□□□□ -1.43
SGIP1-201ENST00000237247 INVSQ9Y283 1065 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 LAMA2P24043 3122 aaKnown RBP6.13□□□□□ -1.43
SGIP1-201ENST00000237247 MYBPHLA2RUH7 354 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 NPIPB8E9PQR5 432 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 M0QZQ0 153 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 HS6ST1O60243 411 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 NDUFS6O75380 124 aaKnown RBP6.12□□□□□ -1.43
SGIP1-201ENST00000237247 ECI2O75521 394 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 LDOC1O95751 146 aaPredicted RBP6.12□□□□□ -1.43
SGIP1-201ENST00000237247 HOXB9P17482 250 aaPredicted RBP6.12□□□□□ -1.43
SGIP1-201ENST00000237247 AKAP5P24588 427 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 PXNP49023 591 aaPredicted RBP6.12□□□□□ -1.43
SGIP1-201ENST00000237247 CLCN4P51793 760 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 ZNF140P52738 457 aaPredicted RBP6.12□□□□□ -1.43
SGIP1-201ENST00000237247 FAPQ12884 760 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 BFSP2Q13515 415 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 CTU2Q2VPK5 515 aaKnown RBP6.12□□□□□ -1.43
SGIP1-201ENST00000237247 C6orf136Q5SQH8 315 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 PNCKQ6P2M8 343 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 PLBD1Q6P4A8 553 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 SHQ1Q6PI26 577 aaKnown RBP6.12□□□□□ -1.43
SGIP1-201ENST00000237247 ANKS3Q6ZW76 656 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 OR7G3Q8NG95 312 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 ATOH1Q92858 354 aaPredicted RBP6.12□□□□□ -1.43
SGIP1-201ENST00000237247 RAB7BQ96AH8 199 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 TRMT2BQ96GJ1 504 aaKnown RBP6.12□□□□□ -1.43
SGIP1-201ENST00000237247 ZNF583Q96ND8 569 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 PITX2Q99697 317 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 PELOQ9BRX2 385 aaKnown RBP6.12□□□□□ -1.43
SGIP1-201ENST00000237247 DSN1Q9H410 356 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 LDAHQ9H6V9 325 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 PCDHB16Q9NRJ7 776 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 OSGIN1Q9UJX0 560 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 ACSL5Q9ULC5 683 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 EDARQ9UNE0 448 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 PIN4Q9Y237 131 aaKnown RBP6.12□□□□□ -1.43
SGIP1-201ENST00000237247 MED16Q9Y2X0 877 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 ATP6AP2A0A1C7CYW4 349 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 DRGXA6NNA5 263 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 TNFRSF10BO14763 440 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 PEX10O60683 326 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 TRIM3O75382 744 aaPredicted RBP6.12□□□□□ -1.43
SGIP1-201ENST00000237247 ATP6AP2O75787 350 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 CLIC3O95833 236 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 SNAI1O95863 264 aaPredicted RBP6.12□□□□□ -1.43
SGIP1-201ENST00000237247 ODC1P11926 461 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 PBX3P40426 434 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 ETV6P41212 452 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 POU3F4P49335 361 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 MEOX2P50222 304 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 YBEYP58557 167 aaPredicted RBP6.12□□□□□ -1.43
SGIP1-201ENST00000237247 GABREP78334 506 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 IL1RL1Q01638 556 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 CD47Q08722 323 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 MPP7Q5T2T1 576 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 MLIPQ5VWP3 458 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 TYW3Q6IPR3 259 aaKnown RBP6.12□□□□□ -1.43
SGIP1-201ENST00000237247 AMIGO1Q86WK6 493 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 CCDC103Q8IW40 242 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 POC5Q8NA72 575 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 ZBTB44Q8NCP5 570 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 SETD6Q8TBK2 473 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 UBTD2Q8WUN7 234 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 IPCEF1Q8WWN9 437 aaPredicted RBP6.12□□□□□ -1.43
SGIP1-201ENST00000237247 RPL3LQ92901 407 aaKnown RBP6.12□□□□□ -1.43
SGIP1-201ENST00000237247 FCRL2Q96LA5 508 aaPredicted RBP6.12□□□□□ -1.43
SGIP1-201ENST00000237247 FOPNLQ96NB1 174 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 OSMRQ99650 979 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 TRIM45Q9H8W5 580 aaPredicted RBP6.12□□□□□ -1.43
SGIP1-201ENST00000237247 NMUR1Q9HB89 426 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 MALT1Q9UDY8 824 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 INTS6Q9UL03 887 aaKnown RBP6.12□□□□□ -1.43
SGIP1-201ENST00000237247 HS3ST4Q9Y661 456 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 TRAV20A0A0B4J274 112 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 A0A1B0GVM2 712 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 TMEM82A0PJX8 343 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 SLC9B1P1A6NJY1 282 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 CHURC1-FNTBB4DL54 471 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 GNB5O14775 395 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 CNTN5O94779 1100 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 CELF2O95319 508 aaKnown RBP6.12□□□□□ -1.43
SGIP1-201ENST00000237247 RPLP2P05387 115 aaKnown RBP6.12□□□□□ -1.43
SGIP1-201ENST00000237247 HBQ1P09105 142 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 CLEC2LP0C7M8 214 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 TYMPP19971 482 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 EFNA1P20827 205 aaPredicted RBP6.12□□□□□ -1.43
SGIP1-201ENST00000237247 DIO3P55073 304 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 UFM1P61960 85 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 RGS1Q08116 209 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 FAM76BQ5HYJ3 339 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 LRIF1Q5T3J3 769 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 MARC1Q5VT66 337 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 RPS27LQ71UM5 84 aaKnown RBP6.12□□□□□ -1.43
SGIP1-201ENST00000237247 MAMDC2Q7Z304 686 aaPredicted RBP6.12□□□□□ -1.43
SGIP1-201ENST00000237247 PIWIL3Q7Z3Z3 882 aaKnown RBP6.12□□□□□ -1.43
SGIP1-201ENST00000237247 TLK2Q86UE8 772 aa6.12□□□□□ -1.43
SGIP1-201ENST00000237247 CDH24Q86UP0 819 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms