RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 LAS2Q8IYD9 372 aa17.88■□□□□ 0.45
SNX17-201ENST00000233575 NUDT8Q8WV74 236 aa17.88■□□□□ 0.45
SNX17-201ENST00000233575 CMTM5Q96DZ9 223 aa17.88■□□□□ 0.45
SNX17-201ENST00000233575 LRMDAQ9H2I8 198 aa17.88■□□□□ 0.45
SNX17-201ENST00000233575 SLC6A20Q9NP91 592 aa17.88■□□□□ 0.45
SNX17-201ENST00000233575 C1orf109Q9NX04 203 aa17.88■□□□□ 0.45
SNX17-201ENST00000233575 TAS2R1Q9NYW7 299 aa17.88■□□□□ 0.45
SNX17-201ENST00000233575 OR6C2Q9NZP2 312 aa17.88■□□□□ 0.45
SNX17-201ENST00000233575 KLHL20Q9Y2M5 609 aa17.88■□□□□ 0.45
SNX17-201ENST00000233575 SNX11Q9Y5W9 270 aa17.88■□□□□ 0.45
SNX17-201ENST00000233575 OR5K4A6NMS3 321 aa17.88■□□□□ 0.45
SNX17-201ENST00000233575 AQP9O43315 295 aa17.88■□□□□ 0.45
SNX17-201ENST00000233575 RSL1D1O76021 490 aaKnown RBP17.88■□□□□ 0.45
SNX17-201ENST00000233575 HNRNPKP61978 463 aaKnown RBP eCLIP17.88■□□□□ 0.45
SNX17-201ENST00000233575 RPS13P62277 151 aaKnown RBP17.88■□□□□ 0.45
SNX17-201ENST00000233575 SF1Q15637 639 aaKnown RBP17.88■□□□□ 0.45
SNX17-201ENST00000233575 GSTA3Q16772 222 aa17.88■□□□□ 0.45
SNX17-201ENST00000233575 DEFB133Q30KQ1 61 aa17.88■□□□□ 0.45
SNX17-201ENST00000233575 VN1R5Q7Z5H4 357 aa17.88■□□□□ 0.45
SNX17-201ENST00000233575 PLD3Q8IV08 490 aa17.88■□□□□ 0.45
SNX17-201ENST00000233575 MIER2Q8N344 545 aa17.88■□□□□ 0.45
SNX17-201ENST00000233575 RBM15BQ8NDT2 890 aaKnown RBP17.88■□□□□ 0.45
SNX17-201ENST00000233575 OR2L3Q8NG85 312 aa17.88■□□□□ 0.45
SNX17-201ENST00000233575 FSCN3Q9NQT6 498 aa17.88■□□□□ 0.45
SNX17-201ENST00000233575 SPASTQ9UBP0 616 aa17.88■□□□□ 0.45
SNX17-201ENST00000233575 SERTM1A2A2V5 107 aa17.87■□□□□ 0.45
SNX17-201ENST00000233575 ISM1B1AKI9 464 aa17.87■□□□□ 0.45
SNX17-201ENST00000233575 KDM1AO60341 852 aa17.87■□□□□ 0.45
SNX17-201ENST00000233575 HOXB3P14651 431 aaPredicted RBP17.87■□□□□ 0.45
SNX17-201ENST00000233575 PRDX6P30041 224 aa17.87■□□□□ 0.45
SNX17-201ENST00000233575 CCR8P51685 355 aa17.87■□□□□ 0.45
SNX17-201ENST00000233575 CORO7P57737 925 aa17.87■□□□□ 0.45
SNX17-201ENST00000233575 UFM1P61960 85 aa17.87■□□□□ 0.45
SNX17-201ENST00000233575 CSNK1G2P78368 415 aa17.87■□□□□ 0.45
SNX17-201ENST00000233575 HHEXQ03014 270 aa17.87■□□□□ 0.45
SNX17-201ENST00000233575 CSTF3Q12996 717 aaKnown RBP17.87■□□□□ 0.45
SNX17-201ENST00000233575 PTGR1Q14914 329 aa17.87■□□□□ 0.45
SNX17-201ENST00000233575 RPS6KA2Q15349 733 aa17.87■□□□□ 0.45
SNX17-201ENST00000233575 KIAA1614Q5VZ46 1190 aa17.87■□□□□ 0.45
SNX17-201ENST00000233575 TMIGD1Q6UXZ0 262 aa17.87■□□□□ 0.45
SNX17-201ENST00000233575 ADCK2Q7Z695 626 aa17.87■□□□□ 0.45
SNX17-201ENST00000233575 ZFAND4Q86XD8 727 aa17.87■□□□□ 0.45
SNX17-201ENST00000233575 GKN2Q86XP6 184 aa17.87■□□□□ 0.45
SNX17-201ENST00000233575 ANKRD53Q8N9V6 530 aa17.87■□□□□ 0.45
SNX17-201ENST00000233575 OR10G6Q8NH81 332 aa17.87■□□□□ 0.45
SNX17-201ENST00000233575 BRINP2Q9C0B6 783 aa17.87■□□□□ 0.45
SNX17-201ENST00000233575 ACTL8Q9H568 366 aa17.87■□□□□ 0.45
SNX17-201ENST00000233575 PELI2Q9HAT8 420 aa17.87■□□□□ 0.45
SNX17-201ENST00000233575 PRM3Q9NNZ6 103 aa17.87■□□□□ 0.45
SNX17-201ENST00000233575 DOLKQ9UPQ8 538 aa17.87■□□□□ 0.45
SNX17-201ENST00000233575 DLGAP4Q9Y2H0 992 aa17.87■□□□□ 0.45
SNX17-201ENST00000233575 A0A1B0GTW7 788 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 PIAS2O75928 621 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 DNAJC8O75937 253 aaPredicted RBP17.86■□□□□ 0.45
SNX17-201ENST00000233575 EZRP15311 586 aaKnown RBP17.86■□□□□ 0.45
SNX17-201ENST00000233575 PTPN4P29074 926 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 CYLC2Q14093 348 aaPredicted RBP17.86■□□□□ 0.45
SNX17-201ENST00000233575 RBBP5Q15291 538 aaKnown RBP17.86■□□□□ 0.45
SNX17-201ENST00000233575 ZNF423Q2M1K9 1284 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.86■□□□□ 0.45
SNX17-201ENST00000233575 OR4K1Q8NGD4 311 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 RP9Q8TA86 221 aaKnown RBP17.86■□□□□ 0.45
SNX17-201ENST00000233575 FLVCR1-AS1Q8TAF5 88 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 TBC1D10AQ9BXI6 508 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 MRPS30Q9NP92 439 aaKnown RBP17.86■□□□□ 0.45
SNX17-201ENST00000233575 NOP53Q9NZM5 478 aaKnown RBP17.86■□□□□ 0.45
SNX17-201ENST00000233575 BAIAP2L1Q9UHR4 511 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 PILRBQ9UKJ0 227 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 CACNA1EQ15878 2313 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 PI4KAP42356 2102 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 OR6C74A6NCV1 312 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 THRAP10827 490 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 POLR2CP19387 275 aaPredicted RBP17.86■□□□□ 0.45
SNX17-201ENST00000233575 PRPH2P23942 346 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 CTSKP43235 329 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 ZFP36L2P47974 494 aaKnown RBP17.86■□□□□ 0.45
SNX17-201ENST00000233575 SLC25A3Q00325 362 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 REEP5Q00765 189 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 BNIP3Q12983 259 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 LAPTM5Q13571 262 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 CUL3Q13618 768 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 HIST2H2ACQ16777 129 aaPredicted RBP17.86■□□□□ 0.45
SNX17-201ENST00000233575 HIST2H2AA3Q6FI13 130 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 CYP20A1Q6UW02 462 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 TRIM73Q86UV7 250 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 RCN3Q96D15 328 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 REPS1Q96D71 796 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 CMTM7Q96FZ5 175 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 APOLD1Q96LR9 279 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 BTBD10Q9BSF8 475 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 MRPL1Q9BYD6 325 aaKnown RBP17.86■□□□□ 0.45
SNX17-201ENST00000233575 DMRT3Q9NQL9 472 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 VPS29Q9UBQ0 182 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 FBXO4Q9UKT5 387 aa17.86■□□□□ 0.45
SNX17-201ENST00000233575 AIM2O14862 343 aa17.85■□□□□ 0.45
SNX17-201ENST00000233575 PPM1DO15297 605 aa17.85■□□□□ 0.45
SNX17-201ENST00000233575 LCMT2O60294 686 aaKnown RBP17.85■□□□□ 0.45
SNX17-201ENST00000233575 NOBOXO60393 691 aa17.85■□□□□ 0.45
SNX17-201ENST00000233575 TBX6O95947 436 aaPredicted RBP17.85■□□□□ 0.45
SNX17-201ENST00000233575 TGFB1P01137 390 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms