RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 C5orf46Q6UWT4 87 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 FAM92BQ6ZTR7 304 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 KIAA0907Q7Z7F0 614 aaPredicted RBP12.65□□□□□ -0.38
MSH2-201ENST00000233146 DENND6AQ8IWF6 608 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 EFHBQ8N7U6 833 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 ZNF548Q8NEK5 533 aaPredicted RBP12.65□□□□□ -0.38
MSH2-201ENST00000233146 OR2T12Q8NG77 320 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 BRINP2Q9C0B6 783 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 FOLH1BQ9HBA9 442 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 PLCL2Q9UPR0 1127 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 RNF215Q9Y6U7 377 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 FAM234BA2RU67 622 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 MPTX1A8MV57 137 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 WASH4PA8MWX3 477 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 MICAL2O94851 1124 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 C9P02748 559 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 PRR35P0CG20 571 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 JUPP14923 745 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 HK1P19367 917 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 SSTR2P30874 369 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 CLCN5P51795 746 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 C2orf80Q0P641 193 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 CTBP1Q13363 440 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 ZNF367Q7RTV3 350 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 RNF135Q8IUD6 432 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 SPNS2Q8IVW8 549 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 LRRC17Q8N6Y2 441 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 EXOC2Q96KP1 924 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 DCAF13Q9NV06 445 aaKnown RBP12.64□□□□□ -0.39
MSH2-201ENST00000233146 NYAP2Q9P242 653 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 EDARQ9UNE0 448 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 MGAT4BQ9UQ53 548 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 NEUROG3Q9Y4Z2 214 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 BRCA1P38398 1863 aaKnown RBP12.64□□□□□ -0.39
MSH2-201ENST00000233146 LYRM1O43325 122 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 EIF1BO60739 113 aaKnown RBP12.64□□□□□ -0.39
MSH2-201ENST00000233146 VPS4BO75351 444 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 PRKAR1AP10644 381 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 EIF1P41567 113 aaKnown RBP12.64□□□□□ -0.39
MSH2-201ENST00000233146 TSTQ16762 297 aaKnown RBP12.64□□□□□ -0.39
MSH2-201ENST00000233146 NHLRC3Q5JS37 347 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 ARHGAP17Q68EM7 881 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 OR6B2Q6IFH4 312 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 INTS5Q6P9B9 1019 aaKnown RBP12.64□□□□□ -0.39
MSH2-201ENST00000233146 RASSF6Q6ZTQ3 369 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 EIF3MQ7L2H7 374 aaKnown RBP12.64□□□□□ -0.39
MSH2-201ENST00000233146 DDX53Q86TM3 631 aaKnown RBP12.64□□□□□ -0.39
MSH2-201ENST00000233146 SIAH1Q8IUQ4 282 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 ZNF655Q8N720 491 aaPredicted RBP12.64□□□□□ -0.39
MSH2-201ENST00000233146 DIRAS2Q96HU8 199 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 TTPALQ9BTX7 342 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 AMBNQ9NP70 447 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 TRPM5Q9NZQ8 1165 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 ACAD8Q9UKU7 415 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 OR4F21O95013 312 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 CBX7O95931 251 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 TGM4P49221 684 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 SSX1Q16384 188 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 KLHL22Q53GT1 634 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 KCTD11Q693B1 232 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 OR4F3Q6IEY1 312 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 SLC27A4Q6P1M0 643 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 PID1Q7Z2X4 250 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 CERS5Q8N5B7 392 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 OR2T4Q8NH00 348 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.64□□□□□ -0.392e-7■□□□□ 9.4
MSH2-201ENST00000233146 FAM162AQ96A26 154 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 ARL5BQ96KC2 179 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 MSLNLQ96KJ4 702 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 MYOCQ99972 504 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 DPH7Q9BTV6 452 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 TAPBPLQ9BX59 468 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 XYLT2Q9H1B5 865 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 QTRT2Q9H974 415 aaKnown RBP12.64□□□□□ -0.39
MSH2-201ENST00000233146 BABAM2Q9NXR7 383 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 SLCO1C1Q9NYB5 712 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 ERAP1Q9NZ08 941 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 SPATA2Q9UM82 520 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 PCDHGA6Q9Y5G7 932 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 CDH10Q9Y6N8 788 aa12.64□□□□□ -0.39
MSH2-201ENST00000233146 SCELO95171 688 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 SSTR4P31391 388 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 PLIN5Q00G26 463 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.63□□□□□ -0.39
MSH2-201ENST00000233146 GPR17Q13304 367 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 CDH18Q13634 790 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 C10orf62Q5T681 223 aaPredicted RBP12.63□□□□□ -0.39
MSH2-201ENST00000233146 C19orf18Q8NEA5 215 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 OR8J3Q8NGG0 315 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 CREB3L1Q96BA8 519 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 KCTD15Q96SI1 283 aaPredicted RBP12.63□□□□□ -0.39
MSH2-201ENST00000233146 TMEM175Q9BSA9 504 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 RBCK1Q9BYM8 510 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 ABCC13Q9NSE7 274 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 SNTG1Q9NSN8 517 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 PURGQ9UJV8 347 aaKnown RBP12.63□□□□□ -0.39
MSH2-201ENST00000233146 USP3Q9Y6I4 520 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 H3BM21 787 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 H7C2Y5 167 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 LGALS8O00214 317 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms