RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 NT5DC2Q9H857 520 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 C1GALT1Q9NS00 363 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 SNX7Q9UNH6 387 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 TSC22D4Q9Y3Q8 395 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 TRAF6Q9Y4K3 522 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 H7BY64 318 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 GIPC1O14908 333 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 AZIN1O14977 448 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 CASC3O15234 703 aaKnown RBP13.49□□□□□ -0.25
SEC61B-201ENST00000223641 TGDSO95455 350 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 CPNE6O95741 557 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 CAPN1P07384 714 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 UROSP10746 265 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 HGFP14210 728 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 VARSP26640 1264 aaKnown RBP13.49□□□□□ -0.25
SEC61B-201ENST00000223641 CCR8P51685 355 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 HK2P52789 917 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 GFERP55789 205 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 CCL7P80098 99 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 LAPTM5Q13571 262 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 NAA25Q14CX7 972 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 SH2D4BQ5SQS7 431 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 KANK2Q63ZY3 851 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 FCRL6Q6DN72 434 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 TMEM71Q6P5X7 295 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 FIGLAQ6QHK4 219 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 FAM47EQ6ZV65 393 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 GLRX5Q86SX6 157 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 PAQR7Q86WK9 346 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 CRLF3Q8IUI8 442 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 CHMP6Q96FZ7 201 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 PRAP1Q96NZ9 151 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 TRAPPC9Q96Q05 1148 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 KCNA7Q96RP8 456 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 DPYSL5Q9BPU6 564 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 PLCD4Q9BRC7 762 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 SLC29A3Q9BZD2 475 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 SHCBP1LQ9BZQ2 653 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 CHRNA10Q9GZZ6 450 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 SPNS1Q9H2V7 528 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 PNPOQ9NVS9 261 aa13.49□□□□□ -0.25
SEC61B-201ENST00000223641 GEMIN8Q9NWZ8 242 aaKnown RBP13.49□□□□□ -0.25
SEC61B-201ENST00000223641 ZNF490Q9ULM2 529 aaPredicted RBP13.49□□□□□ -0.25
SEC61B-201ENST00000223641 ZFHX2Q9C0A1 2572 aaPredicted RBP13.49□□□□□ -0.25
SEC61B-201ENST00000223641 SERTM1A2A2V5 107 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 GMNCA6NCL1 334 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 TLCD2A6NGC4 264 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 ZNF195O14628 629 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 TM4SF5O14894 197 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 TOX3O15405 576 aaPredicted RBP13.48□□□□□ -0.25
SEC61B-201ENST00000223641 VIMP08670 466 aaKnown RBP13.48□□□□□ -0.25
SEC61B-201ENST00000223641 HOXB3P14651 431 aaPredicted RBP13.48□□□□□ -0.25
SEC61B-201ENST00000223641 MAGP20916 626 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 CXCR2P25025 360 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 SEC24CP53992 1094 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 REEP5Q00765 189 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 ZNF33BQ06732 778 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 ILKQ13418 452 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 AMZ1Q400G9 498 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 PAGE2BQ5JRK9 111 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 C10orf62Q5T681 223 aaPredicted RBP13.48□□□□□ -0.25
SEC61B-201ENST00000223641 CLEC6AQ6EIG7 209 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 CGB2Q6NT52 195 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 IRGCQ6NXR0 463 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 ZNF574Q6ZN55 896 aaPredicted RBP13.48□□□□□ -0.25
SEC61B-201ENST00000223641 TMPRSS9Q7Z410 1059 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 TRIM73Q86UV7 250 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 CDYL2Q8N8U2 506 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 OR7G3Q8NG95 312 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 WDR48Q8TAF3 677 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 WDR20Q8TBZ3 569 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 METTL6Q8TCB7 284 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 USP7Q93009 1102 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 MAP3K3Q99759 626 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 AIF1LQ9BQI0 150 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 NUDT22Q9BRQ3 303 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 FGFR1OP2Q9NVK5 253 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 RAPGEFL1Q9UHV5 662 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 PILRAQ9UKJ1 303 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 TIMM22Q9Y584 194 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 PCDHGA11Q9Y5H2 935 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 DNAJC15Q9Y5T4 150 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 PCNX2A6NKB5 2137 aa13.48□□□□□ -0.25
SEC61B-201ENST00000223641 MDC1Q14676 2089 aaKnown RBP13.48□□□□□ -0.25
SEC61B-201ENST00000223641 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.47□□□□□ -0.25
SEC61B-201ENST00000223641 TRBC2A0A5B9 178 aa13.47□□□□□ -0.25
SEC61B-201ENST00000223641 TMEM233B4DJY2 109 aa13.47□□□□□ -0.25
SEC61B-201ENST00000223641 SLCO1B7G3V0H7 640 aa13.47□□□□□ -0.25
SEC61B-201ENST00000223641 HGSO14964 777 aaPredicted RBP13.47□□□□□ -0.25
SEC61B-201ENST00000223641 KIF1CO43896 1103 aaKnown RBP13.47□□□□□ -0.25
SEC61B-201ENST00000223641 LCMT2O60294 686 aaKnown RBP13.47□□□□□ -0.25
SEC61B-201ENST00000223641 NRP2O60462 931 aa13.47□□□□□ -0.25
SEC61B-201ENST00000223641 RPLP0P05388 317 aaKnown RBP13.47□□□□□ -0.25
SEC61B-201ENST00000223641 EZRP15311 586 aaKnown RBP13.47□□□□□ -0.25
SEC61B-201ENST00000223641 ST6GAL1P15907 406 aa13.47□□□□□ -0.25
SEC61B-201ENST00000223641 ALOX15P16050 662 aaPredicted RBP13.47□□□□□ -0.25
SEC61B-201ENST00000223641 CDH3P22223 829 aa13.47□□□□□ -0.25
SEC61B-201ENST00000223641 SLBPQ14493 270 aaKnown RBP eCLIP13.47□□□□□ -0.25
SEC61B-201ENST00000223641 ZRSR2Q15696 482 aaKnown RBP13.47□□□□□ -0.25
SEC61B-201ENST00000223641 ZIC1Q15915 447 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms