RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 ADAM15Q13444 863 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 MINDY4Q4G0A6 757 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 PYDC2Q56P42 97 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 CCNYL2Q5T2Q4 361 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 IL23RQ5VWK5 629 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 METTL21CQ5VZV1 264 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 KIAA1161Q6NSJ0 714 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 HPS6Q86YV9 775 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 PRSS58Q8IYP2 241 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 DNAJB14Q8TBM8 379 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 ZFAND2BQ8WV99 257 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 SMPDL3AQ92484 453 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 HOPXQ9BPY8 73 aaPredicted RBP9.15□□□□□ -0.94
CCDC113-201ENST00000219299 XKR8Q9H6D3 395 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 ZNF395Q9H8N7 513 aaPredicted RBP9.15□□□□□ -0.94
CCDC113-201ENST00000219299 MRPS30Q9NP92 439 aaKnown RBP9.15□□□□□ -0.94
CCDC113-201ENST00000219299 CLN6Q9NWW5 311 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 C9JVG2 144 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 I6L893 689 aaPredicted RBP9.15□□□□□ -0.94
CCDC113-201ENST00000219299 IGLV3-27P01718 113 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 ARCN1P48444 511 aaKnown RBP9.15□□□□□ -0.94
CCDC113-201ENST00000219299 PUS10Q3MIT2 529 aaKnown RBP9.15□□□□□ -0.94
CCDC113-201ENST00000219299 MTX3Q5HYI7 312 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 MANEALQ5VSG8 457 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 PRAMEF13Q5VWM6 474 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 AP3S1Q92572 193 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 KIAA1191Q96A73 305 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 IKZF3Q9UKT9 509 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 A8MU76 341 aa9.15□□□□□ -0.95
CCDC113-201ENST00000219299 ZBTB11O95625 1053 aaPredicted RBP9.15□□□□□ -0.95
CCDC113-201ENST00000219299 APBB3O95704 486 aa9.15□□□□□ -0.95
CCDC113-201ENST00000219299 CST1P01037 141 aa9.15□□□□□ -0.95
CCDC113-201ENST00000219299 FOXN2P32314 431 aa9.15□□□□□ -0.95
CCDC113-201ENST00000219299 C6orf52Q5T4I8 152 aa9.15□□□□□ -0.95
CCDC113-201ENST00000219299 TRIM40Q6P9F5 258 aa9.15□□□□□ -0.95
CCDC113-201ENST00000219299 MINDY2Q8NBR6 621 aa9.15□□□□□ -0.95
CCDC113-201ENST00000219299 SRFBP1Q8NEF9 429 aaKnown RBP9.15□□□□□ -0.95
CCDC113-201ENST00000219299 GRPEL2Q8TAA5 225 aa9.15□□□□□ -0.95
CCDC113-201ENST00000219299 NCSTNQ92542 709 aa9.15□□□□□ -0.95
CCDC113-201ENST00000219299 SLC22A18Q96BI1 424 aa9.15□□□□□ -0.95
CCDC113-201ENST00000219299 LRCH3Q96II8 777 aa9.15□□□□□ -0.95
CCDC113-201ENST00000219299 PCBD2Q9H0N5 130 aa9.15□□□□□ -0.95
CCDC113-201ENST00000219299 KLHL1Q9NR64 748 aa9.15□□□□□ -0.95
CCDC113-201ENST00000219299 SUSD2Q9UGT4 822 aa9.15□□□□□ -0.95
CCDC113-201ENST00000219299 ACSL5Q9ULC5 683 aa9.15□□□□□ -0.95
CCDC113-201ENST00000219299 MRPS33Q9Y291 106 aaKnown RBP9.15□□□□□ -0.95
CCDC113-201ENST00000219299 RBMX2Q9Y388 322 aaKnown RBP9.15□□□□□ -0.95
CCDC113-201ENST00000219299 A0A0J9YVX5 310 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 VEGFDO43915 354 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 SDC3O75056 442 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 RFPL1O75677 317 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 SERPINA1P01009 418 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 EGFP01133 1207 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 UROSP10746 265 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 IMPDH1P20839 514 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 GSTM5P46439 218 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 AKR1D1P51857 326 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 HERVK_113P63132 956 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 BICRALQ6AI39 1079 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 RAB43Q86YS6 212 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 DCUN1D3Q8IWE4 304 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 TMIEQ8NEW7 156 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 HTRA1Q92743 480 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 ZNF707Q96C28 371 aaPredicted RBP9.14□□□□□ -0.95
CCDC113-201ENST00000219299 CLPTM1LQ96KA5 538 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 HSPA12BQ96MM6 686 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 PANX1Q96RD7 426 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 RAB11FIP5Q9BXF6 653 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 ERVK-6Q9BXR3 956 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 DERL2Q9GZP9 239 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 SLC32A1Q9H598 525 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 CXorf21Q9HAI6 301 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 ARNT2Q9HBZ2 717 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 OXSMQ9NWU1 459 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 ERGIC3Q9Y282 383 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 C2CD4DB7Z1M9 353 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 EPN2O95208 641 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 ANXA4P09525 319 aaPredicted RBP9.14□□□□□ -0.95
CCDC113-201ENST00000219299 IFNGR2P38484 337 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 CENPAP49450 140 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 OLR1P78380 273 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 ABATP80404 500 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 CYP4F3Q08477 520 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 SLBPQ14493 270 aaKnown RBP eCLIP9.14□□□□□ -0.95
CCDC113-201ENST00000219299 SYCE2Q6PIF2 218 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 GKN2Q86XP6 184 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 CEP97Q8IW35 865 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 SCAIQ8N9R8 606 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 OR2T34Q8NGX1 318 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 FAR1Q8WVX9 515 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 OR52E6Q96RD3 313 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 GPATCH1Q9BRR8 931 aaKnown RBP9.14□□□□□ -0.95
CCDC113-201ENST00000219299 ZNF222Q9UK12 451 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 CORO2BQ9UQ03 480 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 CCDC189A1A4V9 331 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 LOC110117498-PIK3R3F6TDL0 507 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 PIP5K1BO14986 540 aa9.14□□□□□ -0.95
CCDC113-201ENST00000219299 HMGB3O15347 200 aaKnown RBP9.14□□□□□ -0.95
CCDC113-201ENST00000219299 CBSLP0DN79 551 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms