RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 ZCCHC12Q6PEW1 402 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 CEACAM20Q6UY09 585 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 CERS6Q6ZMG9 384 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 TMC8Q8IU68 726 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 MSL3Q8N5Y2 521 aaKnown RBP13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 MCCC1Q96RQ3 725 aaPredicted RBP13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 MRPL15Q9P015 296 aaKnown RBP13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 BAIAP2Q9UQB8 552 aa13.26□□□□□ -0.29
TGFBR3-201ENST00000212355 H7C0S8 307 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 PITX1P78337 314 aaPredicted RBP13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 HNRNPDQ14103 355 aaKnown RBP13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 SLC35G1Q2M3R5 365 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 TMCO2Q7Z6W1 182 aaPredicted RBP13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 RFKQ969G6 155 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 DCSTAMPQ9H295 470 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 SUV39H2Q9H5I1 410 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 NSUN3Q9H649 340 aaKnown RBP13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 XKR8Q9H6D3 395 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 MYH2Q9UKX2 1941 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 IRGMA1A4Y4 181 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 UQCRC1P31930 480 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 ADAM8P78325 824 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 CD47Q08722 323 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 CRHR2Q13324 411 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 ZNF311Q5JNZ3 666 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 YIPF7Q8N8F6 280 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 LRRC20Q8TCA0 184 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 BIRC7Q96CA5 298 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 ZSWIM3Q96MP5 696 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 YBEYP58557 167 aaPredicted RBP13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 PRKCDQ05655 676 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 ILF3Q12906 894 aaKnown RBP eCLIP13.25□□□□□ -0.293e-9■■■■■ 34.9
TGFBR3-201ENST00000212355 ATXN7L3Q14CW9 347 aaPredicted RBP13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 LRRC37A5PQ49AS3 106 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 SHISA4Q96DD7 197 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 HSH2DQ96JZ2 352 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 TBC1D14Q9P2M4 693 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 PRSS56P0CW18 603 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 SLC7A1P30825 629 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 GDI1P31150 447 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 MLLT3P42568 568 aaPredicted RBP13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 ZXDBP98169 803 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 PTGES3Q15185 160 aaKnown RBP13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 NPLOC4Q8TAT6 608 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 THAP3Q8WTV1 239 aaPredicted RBP13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 LGR4Q9BXB1 951 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 TIGARQ9NQ88 270 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 ZNF282Q9UDV7 671 aaPredicted RBP13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 RUVBL1Q9Y265 456 aaKnown RBP13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 DUSP11O75319 330 aaKnown RBP13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 GSK3BP49841 420 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 RHDQ02161 417 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 ZC3HC1Q86WB0 502 aaKnown RBP13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 ZNF676Q8N7Q3 588 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 ZNF611Q8N823 705 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 CLCC1Q96S66 551 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 POLE3Q9NRF9 147 aa13.25□□□□□ -0.29
TGFBR3-201ENST00000212355 VILLO15195 856 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 SLC7A4O43246 635 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 BEST1O76090 585 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 CCR8P51685 355 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 TEAD2Q15562 447 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 MBLAC2Q68D91 279 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 METTL8Q9H825 291 aaKnown RBP13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 TXNRD2Q9NNW7 524 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 DLG5Q8TDM6 1919 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 ASLP04424 464 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 CFIP05156 583 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 LHCGRP22888 699 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 VIPR1P32241 457 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 MAP3K8P41279 467 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 ACTR3P61158 418 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 METTL21CQ5VZV1 264 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 KCTD9Q7L273 389 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 LRP10Q7Z4F1 713 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 ANKFN1Q8N957 763 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 SLC22A8Q8TCC7 542 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 ZBED6CLQ96FA7 236 aaPredicted RBP13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 TFB2MQ9H5Q4 396 aaKnown RBP13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 C14orf119Q9NWQ9 140 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 TIMM8BQ9Y5J9 83 aaPredicted RBP13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 ACTL7AQ9Y615 435 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 BAZ2AQ9UIF9 1905 aaKnown RBP13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 OR2AT4A6NND4 320 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 ATP1B2P14415 290 aaPredicted RBP13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 KELP23276 732 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 INHBEP58166 350 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 OGFRL1Q5TC84 451 aaPredicted RBP13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 PPP2R2DQ66LE6 453 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 FAM217AQ8IXS0 508 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 CGREF1Q99674 301 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 FZD8Q9H461 694 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 RPL26L1Q9UNX3 145 aaKnown RBP13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 SAGE2PA6NJ88 616 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 FAM159BA6NKW6 160 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 GRB7Q14451 532 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 PRAMEF14Q5SWL7 426 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 PRAMEF13Q5VWM6 474 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 SPRYD7Q5W111 196 aa13.24□□□□□ -0.29
TGFBR3-201ENST00000212355 SLC35B2Q8TB61 432 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms