RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Letm2Q7TNU7 480 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Rbm45Q8BHN5 476 aaKnown RBP15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Ppp1r3eQ8BRJ4 279 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Sept11Q8C1B7 431 aaKnown RBP15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Pabpc5Q8C7D3 381 aaKnown RBP15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Klhl28Q9CR40 571 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Olfr701Q9D3U9 316 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Ndufs3Q9DCT2 263 aaKnown RBP15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Psmg2Q9EST4 264 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Elovl2Q9JLJ4 292 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Auts2A0A087WPF7 1261 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Kcna10B2RQA1 511 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 AladP10518 330 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Etv4P28322 485 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Defb23Q30KP0 166 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Pfdn4Q3UWL8 134 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Adamtsl4Q80T21 1036 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Ikzf5Q8BU00 419 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Crispld1Q8CGD2 500 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Plekho2Q8K124 495 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 FbrsQ8R089 466 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Vmn1r84Q8R284 318 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 ClyblQ8R4N0 338 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Mthfd1Q922D8 935 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Tex46Q9CPU3 165 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Gm26657Q9CVR1 127 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Sec13Q9D1M0 322 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Haus5Q9D786 619 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Il23aQ9EQ14 196 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Cldn9Q9Z0S7 217 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Vmn2r114E9Q281 856 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Zfp277E9Q6D6 583 aaKnown RBP15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Gcm2O09102 504 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 SgcgP82348 291 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Cpt1aP97742 773 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Eps8Q08509 821 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Lsg1Q3UM18 644 aaKnown RBP15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Mapkapk3Q3UMW7 384 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Gm5460Q3UQ97 254 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Mep1bQ61847 704 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Kiaa0895Q7TQE7 519 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Teddm1aQ810U2 305 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Zbtb42Q811H0 420 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Clic5Q8BXK9 251 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Dcdc2cQ9D1B8 347 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Slc22a4Q9Z306 553 aa15.38■□□□□ 0.05
Trim39-203ENSMUST00000113706 Mki67E9PVX6 3177 aaKnown RBP15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Gm3854A0A1B0GSS6 495 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Syndig1A2ANU3 258 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Zfp964B2RR88 472 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Dok6Q2MHE5 331 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Zfp78Q5U406 512 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Rpl10Q6ZWV3 214 aaKnown RBP15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Olfr309Q7TS01 308 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Acat3Q80X81 397 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Rbms3Q8BWL5 431 aaKnown RBP15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Arel1Q8CHG5 823 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 BtdQ8CIF4 520 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Abhd4Q8VD66 342 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Olfr437Q8VEV1 310 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Papd4Q91YI6 484 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 MINDY3Q9CV28 444 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Plscr3Q9JIZ9 296 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Hapln1Q9QUP5 356 aaKnown RBP15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Gm13088A2AGW6 460 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Gtf2h4O70422 463 aaKnown RBP15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 H2-M3Q31093 336 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Shcbp1lQ3TTP0 639 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Cyp2j13Q3UNV4 503 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Plk5Q4FZD7 595 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Fam71bQ5STT6 665 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Tfap2cQ61312 449 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Pik3r3Q64143 461 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Tmem151bQ68FE7 561 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Defb36Q8K3U4 67 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Camkk1Q8VBY2 505 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Olfr382Q8VF79 312 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Olfr48Q8VGN4 301 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Zswim1Q9CWV7 455 aaKnown RBP15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Wdr55Q9CX97 388 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Htr3bQ9JHJ5 437 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Thap11Q9JJD0 305 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 CtszQ9WUU7 306 aa15.37■□□□□ 0.05
Trim39-203ENSMUST00000113706 Gm28363A0A087WQW2 129 aa15.36■□□□□ 0.05
Trim39-203ENSMUST00000113706 Gm45233A0A0N4SVE0 221 aa15.36■□□□□ 0.05
Trim39-203ENSMUST00000113706 L3mbtl1A2A5N8 826 aa15.36■□□□□ 0.05
Trim39-203ENSMUST00000113706 Bnc1O35914 961 aa15.36■□□□□ 0.05
Trim39-203ENSMUST00000113706 Ccl4P14097 92 aa15.36■□□□□ 0.05
Trim39-203ENSMUST00000113706 Ceacam1P31809 521 aa15.36■□□□□ 0.05
Trim39-203ENSMUST00000113706 NadkP58058 439 aa15.36■□□□□ 0.05
Trim39-203ENSMUST00000113706 Rftn1Q6A0D4 554 aa15.36■□□□□ 0.05
Trim39-203ENSMUST00000113706 Wdr91Q7TMQ7 748 aa15.36■□□□□ 0.05
Trim39-203ENSMUST00000113706 Znf569Q80W31 679 aa15.36■□□□□ 0.05
Trim39-203ENSMUST00000113706 Gpr22Q8BZL4 432 aa15.36■□□□□ 0.05
Trim39-203ENSMUST00000113706 Npsr1Q8BZP8 371 aa15.36■□□□□ 0.05
Trim39-203ENSMUST00000113706 Micu1Q8VCX5 477 aa15.36■□□□□ 0.05
Trim39-203ENSMUST00000113706 Olfr659Q8VGV6 322 aa15.36■□□□□ 0.05
Trim39-203ENSMUST00000113706 Ceacam2Q925P2 520 aa15.36■□□□□ 0.05
Trim39-203ENSMUST00000113706 Vnn3Q9QZ25 500 aa15.36■□□□□ 0.05
Trim39-203ENSMUST00000113706 H2-BlV9GXR0 257 aa15.36■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms