RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 LifP09056 203 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Gja1P23242 382 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Pdha2P35487 391 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Tapt1Q4VBD2 564 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Bhlhb9Q6PB60 539 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Rbbp8Q80YR6 893 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 AW551984Q8BGF0 804 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Aifm2Q8BUE4 373 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Aldh4a1Q8CHT0 562 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 MfrpQ8K480 584 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Olfr575Q8VH16 318 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Spcs2Q9CYN2 226 aaKnown RBP17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 PikfyveQ9Z1T6 2097 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Pramef25A2ASI9 494 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Pgbd1E9Q492 415 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Gm10715J3QP74 227 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Sh3yl1O08641 340 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 NagluO88325 739 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Gpr50O88495 591 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Hipk1O88904 1210 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 H2-Q8P14430 326 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Pabpc1P29341 636 aaKnown RBP17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 H2-Q6P79568 326 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Pcgf5Q3UK78 256 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Hdgfl2Q3UMU9 669 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Ccdc185Q3V118 621 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Olfr664Q7TRP5 306 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Slc16a12Q8BGC3 486 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 SheQ8BSD5 492 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Ppp4r4Q8C0Y0 875 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Rnf8Q8VC56 488 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Uts2rQ8VIH9 385 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Gemin6Q9CX53 166 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Zfp773Q9CZ29 471 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Tchhl1Q9D3P1 638 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Yipf5Q9EQQ2 257 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Rdh11Q9QYF1 316 aa17.79■□□□□ 0.44
Trim47-202ENSMUST00000106441 Rad21l1A2AU37 552 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 Dlgap4B1AZP2 992 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 Tsga10ipF7A1F0 157 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 Zfp846G3X996 541 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 Gm10324L7N208 604 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 Bnc1O35914 961 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 Gnpda1O88958 289 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 AldocP05063 363 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 Csf2rb2P26954 878 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 Ccr7P47774 378 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 Epb42P49222 691 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 Arl1P61211 181 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 Isl1P61372 349 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 Gjb5Q02739 271 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 Ms4a15Q3UPL6 245 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 Ipcef1Q5DU31 406 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 Rnf43Q5NCP0 784 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 BadQ61337 204 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 Trim17Q7TPM3 477 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 Cyp20a1Q8BKE6 462 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 Dcaf12l1Q8CBW4 501 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 Ttc4Q8R3H9 386 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 Ndufs2Q91WD5 463 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 Rbm47Q91WT8 590 aaKnown RBP17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 Pcdhga11Q91XY8 933 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 Adgrl4Q923X1 739 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 Timm50Q9D880 353 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 Nif3l1Q9EQ80 376 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 Ing1Q9QXV3 279 aa17.78■□□□□ 0.44
Trim47-202ENSMUST00000106441 MylkQ6PDN3 1941 aaKnown RBP17.77■□□□□ 0.44
Trim47-202ENSMUST00000106441 Zfp362B1ASA5 418 aa17.77■□□□□ 0.44
Trim47-202ENSMUST00000106441 Kcna10B2RQA1 511 aa17.77■□□□□ 0.44
Trim47-202ENSMUST00000106441 Gm4871D3Z0W7 314 aa17.77■□□□□ 0.44
Trim47-202ENSMUST00000106441 Gm2237E9Q501 211 aa17.77■□□□□ 0.44
Trim47-202ENSMUST00000106441 Gm3591K7N6X2 186 aa17.77■□□□□ 0.44
Trim47-202ENSMUST00000106441 P01636 108 aa17.77■□□□□ 0.44
Trim47-202ENSMUST00000106441 Ncam1P13595 1115 aa17.77■□□□□ 0.44
Trim47-202ENSMUST00000106441 Slc16a1P53986 493 aa17.77■□□□□ 0.44
Trim47-202ENSMUST00000106441 ErgP81270 486 aa17.77■□□□□ 0.44
Trim47-202ENSMUST00000106441 Spata6Q3U6K5 488 aa17.77■□□□□ 0.44
Trim47-202ENSMUST00000106441 Zfp791Q497V9 528 aa17.77■□□□□ 0.44
Trim47-202ENSMUST00000106441 Klf4Q60793 483 aa17.77■□□□□ 0.44
Trim47-202ENSMUST00000106441 Dcaf13Q6PAC3 445 aaKnown RBP17.77■□□□□ 0.44
Trim47-202ENSMUST00000106441 Adgrd1Q80T32 903 aa17.77■□□□□ 0.44
Trim47-202ENSMUST00000106441 Tmtc4Q8BG19 741 aa17.77■□□□□ 0.44
Trim47-202ENSMUST00000106441 Sh3rf2Q8BZT2 735 aa17.77■□□□□ 0.44
Trim47-202ENSMUST00000106441 Diras1Q91Z61 198 aa17.77■□□□□ 0.44
Trim47-202ENSMUST00000106441 PyurfQ9D1C3 112 aa17.77■□□□□ 0.44
Trim47-202ENSMUST00000106441 4930578G10RikQ9D4Q4 153 aa17.77■□□□□ 0.44
Trim47-202ENSMUST00000106441 Olfr1480A0A140LIR8 359 aa17.77■□□□□ 0.43
Trim47-202ENSMUST00000106441 4930595M18RikA2RRY9 829 aa17.77■□□□□ 0.43
Trim47-202ENSMUST00000106441 Gm10718D3Z1I7 227 aa17.77■□□□□ 0.43
Trim47-202ENSMUST00000106441 Ap1arE9PYF7 298 aa17.77■□□□□ 0.43
Trim47-202ENSMUST00000106441 Pdx1P52946 284 aa17.77■□□□□ 0.43
Trim47-202ENSMUST00000106441 A630001G21RikQ3UTB2 229 aa17.77■□□□□ 0.43
Trim47-202ENSMUST00000106441 Slc23a3Q60850 611 aa17.77■□□□□ 0.43
Trim47-202ENSMUST00000106441 Lix1Q6P566 282 aa17.77■□□□□ 0.43
Trim47-202ENSMUST00000106441 Tmem164Q6PHN7 296 aa17.77■□□□□ 0.43
Trim47-202ENSMUST00000106441 Gpr171Q8BG55 319 aa17.77■□□□□ 0.43
Trim47-202ENSMUST00000106441 Timm29Q8BGX2 266 aa17.77■□□□□ 0.43
Trim47-202ENSMUST00000106441 Rab39aQ8BHD0 217 aa17.77■□□□□ 0.43
Trim47-202ENSMUST00000106441 Spon2Q8BMS2 330 aa17.77■□□□□ 0.43
Trim47-202ENSMUST00000106441 Map4k5Q8BPM2 847 aaKnown RBP17.77■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms