RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 B3gnt4Q1RLK6 350 aa21.94■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Col28a1Q2UY11 1141 aa21.94■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Gm5800Q497L3 186 aa21.94■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Mep1bQ61847 704 aa21.94■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Pcdh19Q80TF3 1145 aa21.94■■□□□ 1.1
Scn1b-201ENSMUST00000098548 H2-M10.5Q85ZW7 330 aa21.94■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Trmt12Q8BG71 446 aa21.94■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Pgm2l1Q8CAA7 621 aa21.94■■□□□ 1.1
Scn1b-201ENSMUST00000098548 RtbdnQ8QZY4 247 aa21.94■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Olfr525Q8VGL5 309 aa21.94■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Vsx1Q91V10 363 aa21.94■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Laptm4bQ91XQ6 227 aa21.94■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Fndc8Q9D2H8 321 aa21.94■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Dlc1Q9R0Z9 1092 aa21.94■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Zbtb18Q9WUK6 522 aa21.94■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Colca2F8VPY8 239 aa21.93■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Galnt4O08832 578 aa21.93■■□□□ 1.1
Scn1b-201ENSMUST00000098548 RfngO09009 332 aa21.93■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Chil3O35744 398 aa21.93■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Nanos3P60324 178 aa21.93■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Pak6Q3ULB5 682 aa21.93■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Gm5431Q5NCB3 844 aa21.93■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Slc13a5Q67BT3 572 aa21.93■■□□□ 1.1
Scn1b-201ENSMUST00000098548 KdsrQ6GV12 332 aa21.93■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Tas2r131Q7M708 310 aa21.93■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Tas2r38Q7TQA6 331 aa21.93■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Olfr1322Q7TQW3 310 aa21.93■■□□□ 1.1
Scn1b-201ENSMUST00000098548 AftphQ80WT5 931 aa21.93■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Atl1Q8BH66 558 aa21.93■■□□□ 1.1
Scn1b-201ENSMUST00000098548 PigwQ8C398 503 aa21.93■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Snapc1Q8K0S9 389 aa21.93■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Stx19Q8R1Q0 292 aa21.93■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Vmn1r205Q8R276 316 aa21.93■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Chrna3Q8R4G9 499 aa21.93■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Rab7bQ8VEA8 199 aa21.93■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Olfr868Q8VFI8 309 aa21.93■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Olfr1469Q8VFW5 309 aa21.93■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Olfr1Q8VGI1 314 aa21.93■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Tma16Q9CR02 221 aaKnown RBP21.93■■□□□ 1.1
Scn1b-201ENSMUST00000098548 FopnlQ9CZS3 174 aa21.93■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Ndufaf4Q9D1H6 173 aa21.93■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Mau2Q9D2X5 619 aaKnown RBP21.93■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Ralgapa1Q6GYP7 2035 aa21.92■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Arhgap36B1AUC7 590 aa21.92■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Gnpda1O88958 289 aa21.92■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Srp54P14576 504 aa21.92■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Pxmp2P42925 194 aa21.92■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Zic1P46684 447 aa21.92■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Mapk1P63085 358 aa21.92■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Pld2P97813 933 aa21.92■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Hif3aQ0VBL6 662 aa21.92■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Defb23Q30KP0 166 aa21.92■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Slc22a15Q504N2 544 aa21.92■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Slc10a7Q5PT53 340 aa21.92■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Taar7fQ5QD08 358 aa21.92■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Klhl14Q69ZK5 630 aa21.92■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Sohlh1Q6IUP1 357 aa21.92■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Znf366Q6NS86 746 aa21.92■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Zfp324Q78F42 583 aa21.92■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Prr14Q7TPN9 612 aa21.92■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Ccdc90bQ8C3X2 256 aa21.92■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Dio3Q91ZI8 304 aa21.92■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Dpy30Q99LT0 99 aa21.92■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Scd3Q99PL7 359 aa21.92■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Mnx1Q9QZW9 404 aa21.92■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Dpp6Q9Z218 804 aa21.92■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Tet2Q4JK59 1912 aaKnown RBP21.92■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Syndig1A2ANU3 258 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Zfp938E9Q9G3 579 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Gm6356L7N2A7 188 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 A4galtQ67BJ4 359 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 N4bp1Q6A037 893 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Actr8Q8R2S9 624 aaKnown RBP21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Lsm1Q8VC85 133 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Dtnbp1Q91WZ8 352 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Chst15Q91XQ5 561 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Pcyt2Q922E4 404 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Ndufs3Q9DCT2 263 aaKnown RBP21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Slc28a3Q9ERH8 703 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Gtf2h2Q9JIB4 396 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Phf11bB4XVQ1 276 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Krt90E9Q1Z0 538 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Vmn1r169L7N275 304 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Polr2jO08740 117 aaKnown RBP21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Ikzf3O08900 507 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 EdaO54693 391 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Cd3gP11942 182 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Psmd3P14685 530 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Cr2P19070 1025 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Csf2rbP26955 896 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Chrm4P32211 479 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Eps8Q08509 821 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Fahd2Q3TC72 313 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Axdnd1Q3UZ57 424 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Pnpla1Q3V1D5 599 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Nxph1Q61200 271 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 OmpQ64288 163 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Mc2rQ64326 296 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Psd2Q6P1I6 770 aa21.91■■□□□ 1.1
Scn1b-201ENSMUST00000098548 Med26Q7TN02 588 aa21.91■■□□□ 1.1
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms